Detailed information NTG1064692

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACHMW6_RS04405
• Genome accession: NZ_CP171977
• Coordinates: 806634..807689 (-)
• Length: 351 a.a.
• NCBI ID: WP_395405886.1
• Uniprot ID: -
• Organism: Pseudoduganella sp. UC29_106
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 801634..812689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHMW6_RS04380 (ACHMW6_04370)	-	802591..803031 (-)	441	WP_395405880.1	hypothetical protein	-
ACHMW6_RS04385 (ACHMW6_04375)	-	803148..803681 (-)	534	WP_395405882.1	PEP-CTERM sorting domain-containing protein	-
ACHMW6_RS04390 (ACHMW6_04380)	rpoH	803895..804749 (-)	855	WP_395408526.1	RNA polymerase sigma factor RpoH	-
ACHMW6_RS04395 (ACHMW6_04385)	ftsX	805056..805970 (-)	915	WP_395405884.1	permease-like cell division protein FtsX	-
ACHMW6_RS04400 (ACHMW6_04390)	-	805967..806626 (-)	660	WP_395408527.1	cell division ATP-binding protein FtsE	-
ACHMW6_RS04405 (ACHMW6_04395)	pilA	806634..807689 (-)	1056	WP_395405886.1	signal recognition particle-docking protein FtsY	Machinery gene
ACHMW6_RS04410 (ACHMW6_04400)	-	807748..808743 (-)	996	WP_395405888.1	MerR family transcriptional regulator	-
ACHMW6_RS04415 (ACHMW6_04405)	-	809134..809400 (+)	267	WP_395405890.1	porin	-
ACHMW6_RS04420 (ACHMW6_04410)	-	809552..809989 (+)	438	WP_395408528.1	porin	-
ACHMW6_RS04425 (ACHMW6_04415)	-	809986..810204 (+)	219	WP_395405892.1	porin	-
ACHMW6_RS04430 (ACHMW6_04420)	-	810311..810835 (+)	525	WP_395405894.1	hypothetical protein	-
ACHMW6_RS04435 (ACHMW6_04425)	-	810902..812610 (-)	1709	Protein_783	thiamine pyrophosphate-binding protein	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37455.35 Da
• Isoelectric Point: 5.4930

>NTDB_id=1064692 ACHMW6_RS04405 WP_395405886.1 806634..807689(-) (pilA) [Pseudoduganella sp. UC29_106]
MFSFFKKKPVVPETPAPAVAPEAPPPVPTATAEVASDAVGPLAFEVETAARPEKQSWMSRLKAGLSKTSANLSVLFVGAK
IDEDLYEELEAALLMSDAGIDATQYLLDALRRKVKDEKLLDAAAVKQALKELLIELLEPLQKPFELGRHQPLVMMISGVN
GAGKTTTIGKLAKHMQAHGQSVLLAAGDTFRAAAREQLMVWGQRNNVTVISQESGDPAAVSFDAVQSGKARGTDVVMIDT
AGRLPTQLHLMEELKKVKRVIGKGQEGAPHETLLVIDGNTGQNALAQVKAFDDALQLTGLIITKLDGTAKGGIIAAIARV
RPVPVYFIGIGEKIEDLQPFDAAEFVEALLA

Nucleotide

• Length: 1056 bp

>NTDB_id=1064692 ACHMW6_RS04405 WP_395405886.1 806634..807689(-) (pilA) [Pseudoduganella sp. UC29_106]
ATGTTCAGTTTCTTCAAGAAAAAACCAGTCGTTCCCGAAACGCCTGCGCCTGCCGTTGCGCCGGAAGCGCCGCCGCCCGT
GCCCACGGCCACCGCCGAAGTGGCCAGCGACGCTGTCGGCCCCCTTGCTTTCGAGGTAGAGACTGCCGCGCGCCCGGAGA
AGCAATCCTGGATGAGCCGCCTGAAGGCCGGCCTGTCGAAGACGTCGGCCAATCTTTCCGTGCTCTTCGTCGGCGCCAAG
ATCGATGAAGACCTGTACGAGGAACTGGAAGCGGCCCTGCTGATGTCCGACGCCGGCATCGACGCCACCCAATACCTGCT
GGACGCGCTGAGGCGCAAGGTCAAGGATGAAAAGCTGCTGGACGCCGCCGCCGTCAAGCAGGCCCTGAAGGAATTGCTGA
TCGAGTTGCTGGAACCGCTGCAGAAGCCTTTCGAGCTGGGCCGCCACCAGCCGCTGGTGATGATGATTTCCGGCGTCAAC
GGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCATATGCAGGCGCACGGCCAGTCCGTGCTGCTGGCCGCCGG
CGACACGTTCCGCGCCGCCGCCCGCGAGCAGCTGATGGTCTGGGGCCAGCGCAACAATGTGACCGTGATTTCCCAGGAGT
CGGGCGACCCGGCGGCCGTGTCCTTCGACGCGGTCCAGTCCGGCAAGGCGCGCGGCACCGATGTCGTCATGATCGACACC
GCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTCAAGCGCGTGATCGGCAAGGGCCAGGAAGG
CGCGCCGCACGAAACCCTGCTCGTCATCGACGGCAATACGGGCCAGAACGCCCTGGCCCAGGTGAAAGCCTTCGACGATG
CGCTGCAACTGACCGGCCTGATCATCACCAAGCTGGACGGCACCGCCAAGGGCGGTATCATCGCCGCCATCGCCCGTGTG
CGCCCGGTGCCGGTCTATTTCATCGGCATCGGCGAAAAGATTGAAGACCTGCAGCCCTTTGATGCGGCTGAGTTTGTTGA
AGCACTGCTTGCATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (152-350)

• SRP54-type protein, helical bundle domain (SRP54_N) (78-131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.739	99.43	0.584