Detailed information NTG1064649

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACHFJ9_RS19800
• Genome accession: NZ_CP171887
• Coordinates: 2560878..2564264 (+)
• Length: 1128 a.a.
• NCBI ID: WP_395356045.1
• Uniprot ID: -
• Organism: Vibrio sp. D3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2555878..2569264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHFJ9_RS19780 (ACHFJ9_19780)	erpA	2556234..2556575 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
ACHFJ9_RS19785 (ACHFJ9_19785)	hemL	2556822..2558117 (+)	1296	WP_374081917.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACHFJ9_RS19790 (ACHFJ9_19790)	-	2558464..2559549 (+)	1086	WP_074191761.1	AI-2E family transporter	-
ACHFJ9_RS19795 (ACHFJ9_19795)	rsmC	2559626..2560651 (+)	1026	WP_006743286.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACHFJ9_RS19800 (ACHFJ9_19800)	chiS	2560878..2564264 (+)	3387	WP_395356045.1	response regulator	Regulator
ACHFJ9_RS19805 (ACHFJ9_19805)	-	2565042..2566724 (+)	1683	WP_005394703.1	ABC transporter substrate-binding protein	-
ACHFJ9_RS19810 (ACHFJ9_19810)	-	2566895..2567881 (+)	987	WP_237308309.1	ABC transporter permease	-
ACHFJ9_RS19815 (ACHFJ9_19815)	-	2567884..2568909 (+)	1026	WP_005394707.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127008.61 Da
• Isoelectric Point: 5.4346

>NTDB_id=1064649 ACHFJ9_RS19800 WP_395356045.1 2560878..2564264(+) (chiS) [Vibrio sp. D3]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDD
TTFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKVVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQTTQTLAAHGHFQIPEIDVENSEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRIEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASQAEMRHMENKILESELRQRAAVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRNLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREILVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1064649 ACHFJ9_RS19800 WP_395356045.1 2560878..2564264(+) (chiS) [Vibrio sp. D3]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACTATTACTGCGATCTTTTTCCTACAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACATTTGTTGT
CTGTTCGAGATACAAAACAACAGCAAATTATCGACTACTTTGAGGCGCGGGAAACCGAAGTCATGGGCTTTGTGCGCTCT
GAACTGGCTTACGCCAGTGGTGGTCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGTAATGACATTGAAGAATC
TCGTAAAAATGCCCAACAGCGCTACATTGAAGGCAGCGGAGATCAAATCAAAACGTCAACGTTACCCGAGTCTTCCAACT
ATGTCGGAAGTGAACGTTACCGACTCTTACATAAACGTTACCACTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGATATTTTGCTGGTCGATATCAACGGTAATGTCACCTACTCGATCAACAAAGACGATAACTACGGAACAAACTTATT
ATCAGGCCCCTACAAAGACTCAGCACTTGGCAAAACCTTCAAGCGTCTAGCTGATGACGTCACTGAACGCCGTAAGGTGA
ATGAAGACTACACCCCTGTGATTGTGTCTGATTTCGAACTGGAAGGTGGTAAACAAGTCGCTTGGTTAGGTGCTCCAATT
GTTCAGCAAGGCTACCTACACAGCTATGCTATGTTCCGCTTACCAAATAATGGCATCACGAAGTTAGCCGCTGACGCCAA
CCGAGAGTCATCCATTAACACCTTACTGGTTGGAAATGATCACCAACCTCGCACAATTAACACCAAGCAAGATGACATTA
AGAACAGCTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGCGTCGGCACTTACACGAACGGTTTAGGTGAAGAG
ATCATCGCTGCTTATGCACCGATTGAAACGCGTGGTGTTATTTGGGCACTCGTCGTGCAATTACCTGAAAACGAAGCTTT
CGCTCGTATTCATCAACTCGAAAAACTGTTTGTTATCGCCATGCTGATCGCCATCATTCTAGTGGTAATCGCTTCCCATT
ATTTATCAAATTTTATTACTTCTCCGTTGCTGAAGTTAACTTGGGCTGCCGAAAAAGTGTCTGCCGGAGATCTTGATGAC
ACCACCTTTAATACGGTTCGCAAAGATGAAATTGGCCGTCTTGCGCTGAGTTTTGAACGAATGCAACGCTCTATTCGAGA
GAAAATTCAAACCATTAAGAAGCAAAATGAAGAGCTCGAGAGCAACATACAGATCATTCAAAAACAAAATGATGAACTGC
AATTGGCCGACAAACTTAAAGATGAGTTCTTAGCCACCACTTCTCATGAACTCCGCACACCATTGCACGGCATGGTCGGA
ATCGCTGAGACTTTAGCGTCCGGCGCTAACGGTGCTATTCCTGCTAGCCAAAAATATCAGCTTGATATCATCATTAAAAG
TGGGCAACGTCTCGCAAACCTTGTTGATGACTTATTGGATTATCATAAAATGCGTTACGGAAGCATGGATATCCAGAAGT
CAGCGGTGAGTTTAGCCAGTGCAACGCGACTGGTACTAGAGCTTTCCAGCCATTTACTCGGAAATAAAACCATCCGTATC
ATCAACCAAGTACCAGCGGATTTGAAAGTGGTGTCTGCCGATCCTCAACGCCTTGAACAAGTGTTATATAACCTGATCGG
TAATGCGATTAAGTACACCTCAGAAGGTAAAATCGTTATCTCCGCCAATGTGGTTGATGATCATGTTCGTGTGCAAGTTG
TGGATACTGGGCAAGGTATTCCCGCAGAACATCTTGAACATATTTTCGAACCACTTATCCAAGCAGGACAAGACGCAAGT
CGCTATCGTCAAGGTGCGGGGCTCGGGCTTTCGATTAGCCGTCAATTGATTGAGTTGATGGGTGGCTCGTTATACGTCAG
CAGCCAGCCTATGGTCGGCACCACCTTCAGTTTCACGTTACCACTTGCCAGTGAAGAAGAGATCCAAACAACTCAAACCC
TTGCTGCGCACGGACACTTCCAGATTCCTGAAATCGATGTAGAGAACAGTGAAGACTTATCGCTGCCAGAGAATCCAGAC
GGCCCGTTATTGTATGTCGCTGACGATGAGCCAGTAAACCTGCGTGTGCTTGAGAGCTTCTTACGTATAGAGGGCTATCG
CGTACGTACCGTCTCTGATGGGCCAGAAACATTAGCACTCGTTGAGCAGGAAAAACCGGAACTCCTATTATTGGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTCTGCAGTGAATTACGTGAAACTTATGATCATGCCGAGCTACCTATCATTATG
CTCACCGCGCTTAGTCAAACAGAAGATCGTGTACGAGGCTTTGAAGCAGGAGCCAACGACTATTTGTCTAAGCCATTCAA
TAAACAAGAGCTAGCTGCACGCATCCAAGCGCACTTAACGGCAAGCCAAGCAGAAATGCGCCATATGGAGAATAAGATAC
TTGAATCTGAACTTCGCCAACGAGCGGCTGTAGAGGCAAGCTTATTAGAAACTCAAGGGCGATTGTTGGAACAACTGGAA
TCGGCTCCTGAAGCGATTATCTGTTTGCGTGAAGATAAACGTATCCGGTTTGCTAATGAAGCTGCTTGCAAGCTATTCAA
GCGTAACTTAGAACAATTAAAACGTTCATCTGCCGATGAGTTGATTGCACCTAAGTATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAAAACATCGAAGCAGACATTCTTAAACTACCTGAAGGCTCA
GGCTTAGATGTCATGTATATCTTTAATGTTGGCGGAGGAGCCAATGCCGCTCGCATACACAACCTAGAAACCGCAGTAGA
GGTGCTTTCAAGTTATGCTTTTGATGGCGATAAAGACCAGCTGCAGAAGCTGAAAGAACTCGGTGGAGAGTTTACACGCC
TTGCAGACAAAGCGCTTGGTAACAAAAAAGACAAACAAGAGCTAATGCGAGAAATTCTGGTCGACGCAATGACACATGCC
TTAGAGTATTGGGAGTCAGTCACTGGTGAAAGTAAATTCGCATTTGCCGAACAAAGTGGCTTATGGCGCGTTTATCTTGA
CCGTAGCACTCTGCAAACACGCACTTTGGATAAATACATGCGTATAGAAACGCTGCCAAAAACGCCACGTTGGAGAACGG
TATTGAGCTCGATAGAATTCATCCTTGAACACTGTAAAGAACAGAGTCCCGAGCGTGCATACATCGAAGCTCAACGAGAT
AAACTACAGCGACTGTTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764