Detailed information NTG1064519

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACHGPQ_RS03785
• Genome accession: NZ_CP171856
• Coordinates: 822979..824118 (-)
• Length: 379 a.a.
• NCBI ID: WP_020831131.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain NIB_Z_3685
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 817979..829118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHGPQ_RS03760 (ACHGPQ_03760)	-	818679..819941 (-)	1263	WP_197368343.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
ACHGPQ_RS03765 (ACHGPQ_03765)	-	820218..820844 (-)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
ACHGPQ_RS03770 (ACHGPQ_03770)	-	820992..821693 (+)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
ACHGPQ_RS03775 (ACHGPQ_03775)	maiA	821697..822347 (+)	651	WP_058907459.1	maleylacetoacetate isomerase	-
ACHGPQ_RS03780 (ACHGPQ_03780)	-	822344..822982 (+)	639	WP_201016222.1	LysE/ArgO family amino acid transporter	-
ACHGPQ_RS03785 (ACHGPQ_03785)	pilA	822979..824118 (-)	1140	WP_020831131.1	signal recognition particle-docking protein FtsY	Machinery gene
ACHGPQ_RS03790 (ACHGPQ_03790)	-	824179..825684 (+)	1506	WP_011000350.1	M16 family metallopeptidase	-
ACHGPQ_RS03795 (ACHGPQ_03795)	-	825684..827027 (+)	1344	WP_011000351.1	M16 family metallopeptidase	-
ACHGPQ_RS03800 (ACHGPQ_03800)	rsmD	827108..827755 (+)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACHGPQ_RS03805 (ACHGPQ_03805)	coaD	827951..828457 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
ACHGPQ_RS03810 (ACHGPQ_03810)	-	828508..828756 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40157.41 Da
• Isoelectric Point: 5.8101

>NTDB_id=1064519 ACHGPQ_RS03785 WP_020831131.1 822979..824118(-) (pilA) [Ralstonia pseudosolanacearum strain NIB_Z_3685]
MFSFWKKRKAEPQPAAELAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=1064519 ACHGPQ_RS03785 WP_020831131.1 822979..824118(-) (pilA) [Ralstonia pseudosolanacearum strain NIB_Z_3685]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACTGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGTTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.573