Detailed information NTG1064373

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACHD8M_RS18640
• Genome accession: NZ_CP171807
• Coordinates: 3696539..3697684 (+)
• Length: 381 a.a.
• NCBI ID: WP_159353554.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BRI3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3691539..3702684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHD8M_RS18620	-	3692014..3692730 (-)	717	WP_159353552.1	Crp/Fnr family transcriptional regulator	-
ACHD8M_RS18625	narK	3692828..3694018 (-)	1191	WP_159353553.1	nitrate transporter NarK	-
ACHD8M_RS18630	argS	3694152..3695822 (-)	1671	WP_014419127.1	arginine--tRNA ligase	-
ACHD8M_RS18635	-	3695819..3696247 (-)	429	WP_014419128.1	DUF1934 domain-containing protein	-
ACHD8M_RS18640	rapF	3696539..3697684 (+)	1146	WP_159353554.1	aspartate phosphatase	Regulator
ACHD8M_RS18645	-	3697668..3697787 (+)	120	WP_129091332.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACHD8M_RS18650	speB	3697910..3698782 (-)	873	WP_007614448.1	agmatinase	-
ACHD8M_RS18655	speE	3698841..3699671 (-)	831	WP_003151052.1	spermidine synthase	-
ACHD8M_RS18660	-	3699871..3701943 (+)	2073	WP_022553937.1	transglycosylase domain-containing protein	-
ACHD8M_RS18665	-	3701968..3702399 (-)	432	WP_022553938.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45712.19 Da
• Isoelectric Point: 5.1522

>NTDB_id=1064373 ACHD8M_RS18640 WP_159353554.1 3696539..3697684(+) (rapF) [Bacillus velezensis strain BRI3]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSELLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYAKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYFIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTLAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFAKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1064373 ACHD8M_RS18640 WP_159353554.1 3696539..3697684(+) (rapF) [Bacillus velezensis strain BRI3]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTACGGAGAGAAATCAAAGAAGAACTTGCAGGCCTGGAAGATGATCAAGATCTACATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGAGCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
CTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTCATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGTTGGCTGAAT
TAGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCAATAGCTGTTTTTGCAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACTCAGATTTATTTTAAGTTAGAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAGTATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	69.029	100	0.69
rapC	Bacillus subtilis subsp. subtilis str. 168	52.895	99.738	0.528