Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACHD8M_RS07820 Genome accession   NZ_CP171807
Coordinates   1457894..1458490 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain BRI3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1452894..1463490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHD8M_RS07790 - 1453108..1453563 (+) 456 WP_159354097.1 flavodoxin -
  ACHD8M_RS07795 dapD 1453645..1454355 (+) 711 WP_016936297.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACHD8M_RS07800 - 1454426..1455550 (+) 1125 WP_159354098.1 N-acetyldiaminopimelate deacetylase -
  ACHD8M_RS07805 - 1455611..1455856 (+) 246 WP_013352084.1 YkuS family protein -
  ACHD8M_RS07810 - 1455890..1456696 (-) 807 WP_159354099.1 mechanosensitive ion channel family protein -
  ACHD8M_RS07815 - 1456984..1457442 (+) 459 WP_014417617.1 TlpA disulfide reductase family protein -
  ACHD8M_RS07820 rok 1457894..1458490 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  ACHD8M_RS07825 - 1458511..1459503 (-) 993 WP_021493753.1 hypothetical protein -
  ACHD8M_RS07830 - 1459649..1460251 (+) 603 WP_159354100.1 molybdenum cofactor guanylyltransferase -
  ACHD8M_RS07835 - 1460303..1461322 (+) 1020 WP_110085530.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACHD8M_RS07840 glp 1461340..1462632 (+) 1293 WP_159354101.1 gephyrin-like molybdotransferase Glp -
  ACHD8M_RS07845 mobB 1462593..1463114 (+) 522 WP_032863763.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=1064331 ACHD8M_RS07820 WP_003154591.1 1457894..1458490(+) (rok) [Bacillus velezensis strain BRI3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1064331 ACHD8M_RS07820 WP_003154591.1 1457894..1458490(+) (rok) [Bacillus velezensis strain BRI3]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment