Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACHD8M_RS07715 Genome accession   NZ_CP171807
Coordinates   1441919..1442383 (-) Length   154 a.a.
NCBI ID   WP_159354090.1    Uniprot ID   -
Organism   Bacillus velezensis strain BRI3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1436919..1447383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHD8M_RS07695 - 1437400..1439220 (+) 1821 WP_159354088.1 PAS domain-containing protein -
  ACHD8M_RS07700 - 1439201..1440414 (-) 1214 Protein_1458 aminotransferase A -
  ACHD8M_RS07705 - 1440615..1440776 (-) 162 WP_007409608.1 hypothetical protein -
  ACHD8M_RS07710 cheV 1440965..1441876 (+) 912 WP_159354089.1 chemotaxis protein CheV -
  ACHD8M_RS07715 kre 1441919..1442383 (-) 465 WP_159354090.1 YkyB family protein Regulator
  ACHD8M_RS07720 - 1442506..1443798 (-) 1293 WP_159354091.1 MFS transporter -
  ACHD8M_RS07725 - 1443874..1443945 (-) 72 WP_395606277.1 hypothetical protein -
  ACHD8M_RS07730 - 1443990..1444475 (-) 486 Protein_1464 L,D-transpeptidase family protein -
  ACHD8M_RS07735 - 1444550..1445413 (-) 864 WP_159354092.1 metallophosphoesterase -
  ACHD8M_RS07740 fadH 1445557..1446321 (+) 765 WP_159354093.1 2,4-dienoyl-CoA reductase -
  ACHD8M_RS07745 - 1446436..1446993 (+) 558 WP_159354094.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17810.58 Da        Isoelectric Point: 10.4417

>NTDB_id=1064330 ACHD8M_RS07715 WP_159354090.1 1441919..1442383(-) (kre) [Bacillus velezensis strain BRI3]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQYLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1064330 ACHD8M_RS07715 WP_159354090.1 1441919..1442383(-) (kre) [Bacillus velezensis strain BRI3]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGTATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.208

100

0.922

Multiple sequence alignment