Detailed information NTG1064310

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACHD8M_RS01955
• Genome accession: NZ_CP171807
• Coordinates: 389358..390506 (+)
• Length: 382 a.a.
• NCBI ID: WP_159353775.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BRI3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 384358..395506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHD8M_RS01935	-	384758..385441 (-)	684	WP_022552585.1	ABC transporter ATP-binding protein	-
ACHD8M_RS01940	-	385456..386889 (-)	1434	WP_159353774.1	ABC transporter permease	-
ACHD8M_RS01945	-	387102..387785 (+)	684	WP_014416901.1	response regulator transcription factor	-
ACHD8M_RS01950	-	387772..389199 (+)	1428	WP_100261600.1	HAMP domain-containing sensor histidine kinase	-
ACHD8M_RS01955	rapC	389358..390506 (+)	1149	WP_159353775.1	tetratricopeptide repeat protein	Regulator
ACHD8M_RS01960	phrC	390490..390609 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACHD8M_RS01965	-	390760..390870 (-)	111	WP_395606235.1	YjcZ family sporulation protein	-
ACHD8M_RS01970	-	390950..392314 (-)	1365	WP_159353777.1	aspartate kinase	-
ACHD8M_RS01975	ceuB	392728..393681 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
ACHD8M_RS01980	-	393671..394618 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
ACHD8M_RS01985	-	394612..395370 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45566.81 Da
• Isoelectric Point: 4.9323

>NTDB_id=1064310 ACHD8M_RS01955 WP_159353775.1 389358..390506(+) (rapC) [Bacillus velezensis strain BRI3]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKELLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1064310 ACHD8M_RS01955 WP_159353775.1 389358..390506(+) (rapC) [Bacillus velezensis strain BRI3]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAATTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGAGCTTCTCGATTATTATGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGATTGTGCTACTACAATCAGGACCGCATCGGT
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	81.937	100	0.819
rapF	Bacillus subtilis subsp. subtilis str. 168	56.842	99.476	0.565