Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | QUC96_RS00215 | Genome accession | NZ_CP171742 |
| Coordinates | 41697..42671 (-) | Length | 324 a.a. |
| NCBI ID | WP_257070565.1 | Uniprot ID | - |
| Organism | Staphylococcus hyicus strain SC310 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 36697..47671
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUC96_RS00180 (QUC96_000180) | gcvT | 37298..38389 (-) | 1092 | WP_107632992.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| QUC96_RS00185 (QUC96_000185) | - | 38544..39074 (-) | 531 | WP_107632993.1 | shikimate kinase | - |
| QUC96_RS00190 (QUC96_000190) | - | 39052..39249 (-) | 198 | WP_039645590.1 | hypothetical protein | - |
| QUC96_RS00195 (QUC96_000195) | - | 39233..39715 (-) | 483 | WP_039645587.1 | competence type IV pilus minor pilin ComGF | - |
| QUC96_RS00200 (QUC96_000200) | comGD | 39908..40339 (-) | 432 | WP_209260663.1 | competence type IV pilus minor pilin ComGD | - |
| QUC96_RS00205 (QUC96_000205) | comGC | 40329..40649 (-) | 321 | WP_107632995.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QUC96_RS00210 (QUC96_000210) | comGB | 40661..41728 (-) | 1068 | WP_119635812.1 | competence type IV pilus assembly protein ComGB | - |
| QUC96_RS00215 (QUC96_000215) | comGA | 41697..42671 (-) | 975 | WP_257070565.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QUC96_RS00220 (QUC96_000220) | - | 42727..43350 (-) | 624 | WP_107632997.1 | MBL fold metallo-hydrolase | - |
| QUC96_RS00225 (QUC96_000225) | - | 43365..43676 (-) | 312 | WP_039645576.1 | MTH1187 family thiamine-binding protein | - |
| QUC96_RS00230 (QUC96_000230) | - | 43678..44664 (-) | 987 | WP_039645573.1 | ROK family glucokinase | - |
| QUC96_RS00235 (QUC96_000235) | - | 44661..44864 (-) | 204 | WP_039645571.1 | YqgQ family protein | - |
| QUC96_RS00240 (QUC96_000240) | - | 44866..46305 (-) | 1440 | WP_305849953.1 | rhomboid family intramembrane serine protease | - |
| QUC96_RS00245 (QUC96_000245) | - | 46323..46862 (-) | 540 | WP_119635809.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| QUC96_RS00250 (QUC96_000250) | rpmG | 46975..47124 (-) | 150 | WP_037567677.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37003.84 Da Isoelectric Point: 7.2046
>NTDB_id=1064101 QUC96_RS00215 WP_257070565.1 41697..42671(-) (comGA) [Staphylococcus hyicus strain SC310]
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=1064101 QUC96_RS00215 WP_257070565.1 41697..42671(-) (comGA) [Staphylococcus hyicus strain SC310]
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.204 |
99.691 |
0.58 |
| comGA | Staphylococcus aureus N315 |
58.204 |
99.691 |
0.58 |