Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   ACG3JK_RS10010 Genome accession   NZ_CP171738
Coordinates   1959564..1960289 (+) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis strain DB-M23     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1954564..1965289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JK_RS09980 (ACG3JK_09980) - 1954744..1956204 (+) 1461 WP_003104259.1 NCS2 family permease -
  ACG3JK_RS09985 (ACG3JK_09985) tsaE 1956293..1956742 (+) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACG3JK_RS09990 (ACG3JK_09990) - 1956729..1957253 (+) 525 WP_013793665.1 GNAT family N-acetyltransferase -
  ACG3JK_RS09995 (ACG3JK_09995) brpA 1957262..1958551 (+) 1290 WP_013793666.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACG3JK_RS10000 (ACG3JK_10000) - 1958584..1958886 (-) 303 WP_003104696.1 hypothetical protein -
  ACG3JK_RS10005 (ACG3JK_10005) - 1958883..1959302 (-) 420 WP_003103589.1 HIT family protein -
  ACG3JK_RS10010 (ACG3JK_10010) pptA 1959564..1960289 (+) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  ACG3JK_RS10015 (ACG3JK_10015) - 1960292..1961326 (+) 1035 WP_013793667.1 ABC transporter permease -
  ACG3JK_RS10020 (ACG3JK_10020) ccrZ 1961387..1962178 (+) 792 WP_003107547.1 cell cycle regulator CcrZ -
  ACG3JK_RS10025 (ACG3JK_10025) trmB 1962178..1962813 (+) 636 WP_003107546.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACG3JK_RS10035 (ACG3JK_10035) rimP 1963207..1963689 (+) 483 WP_003102760.1 ribosome maturation factor RimP -
  ACG3JK_RS10040 (ACG3JK_10040) nusA 1963778..1964932 (+) 1155 WP_013793668.1 transcription termination factor NusA -
  ACG3JK_RS10045 (ACG3JK_10045) rnpM 1964965..1965243 (+) 279 WP_037620247.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=1064099 ACG3JK_RS10010 WP_003105648.1 1959564..1960289(+) (pptA) [Streptococcus parauberis strain DB-M23]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1064099 ACG3JK_RS10010 WP_003105648.1 1959564..1960289(+) (pptA) [Streptococcus parauberis strain DB-M23]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACGCACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726

  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722


Multiple sequence alignment