Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACG3JK_RS00705 Genome accession   NZ_CP171738
Coordinates   149121..150158 (+) Length   345 a.a.
NCBI ID   WP_003106043.1    Uniprot ID   A0A0E2UF26
Organism   Streptococcus parauberis strain DB-M23     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 144121..155158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JK_RS00680 (ACG3JK_00680) - 144562..145893 (+) 1332 WP_003105780.1 dipeptidase -
  ACG3JK_RS00685 (ACG3JK_00685) arcC 145917..146867 (+) 951 WP_003103897.1 carbamate kinase -
  ACG3JK_RS00690 (ACG3JK_00690) asnA 147035..148027 (+) 993 WP_003105278.1 aspartate--ammonia ligase -
  ACG3JK_RS00695 (ACG3JK_00695) rsmD 148114..148653 (+) 540 WP_013794166.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACG3JK_RS00700 (ACG3JK_00700) coaD 148643..149134 (+) 492 WP_003103109.1 pantetheine-phosphate adenylyltransferase -
  ACG3JK_RS00705 (ACG3JK_00705) sepM 149121..150158 (+) 1038 WP_003106043.1 SepM family pheromone-processing serine protease Regulator
  ACG3JK_RS00710 (ACG3JK_00710) - 150406..151380 (+) 975 WP_045407116.1 LacI family DNA-binding transcriptional regulator -
  ACG3JK_RS00715 (ACG3JK_00715) rbsK 151382..152293 (+) 912 WP_003107330.1 ribokinase -
  ACG3JK_RS00720 (ACG3JK_00720) rbsD 152268..152667 (+) 400 Protein_130 D-ribose pyranase -
  ACG3JK_RS00725 (ACG3JK_00725) - 152679..154157 (+) 1479 WP_003102471.1 sugar ABC transporter ATP-binding protein -
  ACG3JK_RS00730 (ACG3JK_00730) - 154159..155109 (+) 951 WP_003105746.1 ABC transporter permease subunit -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37520.30 Da        Isoelectric Point: 9.9732

>NTDB_id=1064053 ACG3JK_RS00705 WP_003106043.1 149121..150158(+) (sepM) [Streptococcus parauberis strain DB-M23]
MKKNNKLKIWLLGIIAVIAIGFSLFYPLPYYIEMPGGAYDIRSVLKVNEQKDKEKGSYNFVAVSISHATFAQILYAWATP
FTEISSAEATTGGYSDADYMRINQFYMETSQNGAVYQALKKAGKPVSLDYLGVYVLDVSKNSSLKGVLNIADTVTSVNQK
HFKSSADLIKFVSAMKLGDKVSVQYTSNGKDKSANGKIIKLKNGKNGIGISLTDHTKVHTKEKIDFTTEGVGGPSAGLMF
TLDILDQINKEDLRKGRNIAGTGTIDQEGKVGDIGGAGLKVVAAAKEGAEIFFVPNNPVDPRVKKVDPKAITNYKEALEA
AKQLKTKMKIVPVKTVDDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1064053 ACG3JK_RS00705 WP_003106043.1 149121..150158(+) (sepM) [Streptococcus parauberis strain DB-M23]
ATGAAGAAAAATAATAAATTAAAAATCTGGTTATTGGGCATTATTGCTGTCATTGCAATTGGCTTTTCACTATTTTATCC
TCTACCTTATTATATTGAAATGCCTGGTGGTGCCTATGATATCCGTAGTGTCCTTAAGGTAAATGAACAAAAAGACAAGG
AAAAAGGGTCTTATAATTTTGTTGCTGTAAGTATTAGTCATGCGACATTTGCACAAATTCTCTATGCTTGGGCAACACCA
TTTACAGAGATTTCATCAGCAGAAGCAACTACTGGTGGCTATAGTGATGCAGACTACATGAGAATTAATCAATTCTATAT
GGAAACTTCACAAAATGGTGCTGTTTATCAAGCTCTCAAAAAAGCTGGTAAACCTGTTTCCCTTGACTACTTAGGTGTTT
ATGTTCTTGATGTCAGTAAGAATTCTTCTCTTAAAGGGGTTTTGAATATTGCTGATACAGTTACAAGTGTTAATCAAAAA
CACTTTAAGAGTTCAGCTGATTTGATTAAGTTTGTGTCTGCCATGAAGTTGGGGGATAAAGTCAGTGTCCAATATACCAG
TAATGGTAAAGATAAATCAGCCAATGGTAAAATTATTAAGTTGAAAAATGGTAAAAATGGGATTGGAATCAGCTTAACTG
ACCATACCAAAGTACACACTAAAGAAAAAATTGATTTTACAACTGAAGGCGTTGGTGGTCCAAGTGCTGGTTTGATGTTC
ACCCTTGATATTCTTGACCAAATCAATAAAGAAGATTTACGTAAGGGGCGTAATATTGCTGGTACTGGTACAATTGACCA
AGAAGGTAAAGTTGGTGATATTGGTGGTGCAGGCTTAAAAGTAGTTGCAGCTGCTAAAGAAGGGGCAGAGATTTTCTTCG
TTCCTAATAATCCAGTTGATCCGCGTGTCAAAAAAGTTGATCCAAAAGCAATAACTAATTATAAAGAAGCCTTAGAAGCT
GCTAAGCAATTAAAAACAAAAATGAAGATTGTTCCAGTCAAGACAGTCGATGACGCAATCAGTTATCTGAAAAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2UF26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69


Multiple sequence alignment