Detailed information NTG1064014

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ACG3JL_RS01680
• Genome accession: NZ_CP171737
• Coordinates: 315730..316656 (+)
• Length: 308 a.a.
• NCBI ID: WP_041828589.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 310730..321656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JL_RS01670 (ACG3JL_01670)	amiA3	312184..314163 (+)	1980	WP_013794304.1	peptide ABC transporter substrate-binding protein	Regulator
ACG3JL_RS01675 (ACG3JL_01675)	amiC	314231..315730 (+)	1500	WP_013794303.1	ABC transporter permease	Regulator
ACG3JL_RS01680 (ACG3JL_01680)	amiD	315730..316656 (+)	927	WP_041828589.1	oligopeptide ABC transporter permease OppC	Regulator
ACG3JL_RS01685 (ACG3JL_01685)	-	316665..317746 (+)	1082	Protein_311	ABC transporter ATP-binding protein	-
ACG3JL_RS01690 (ACG3JL_01690)	-	317739..318682 (+)	944	Protein_312	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34445.20 Da
• Isoelectric Point: 6.9724

>NTDB_id=1064014 ACG3JL_RS01680 WP_041828589.1 315730..316656(+) (amiD) [Streptococcus parauberis strain DB-M18]
MASIDKSKFEFVELDSYASEVIDAPSYSYWKSVFRQFFSRKSTIVMLVILIAIILMSFVYPMFANYDFGDVTNINDFSKR
YISPNGEYWFGTDKNGQSLFDGVWYGARNSILISVIATAINMIVGVVVGGLWGVSKAVDKVMIEVYNVISNLPQMLIIIV
LTYSIGAGFWNLIFAFCVTGWIGIAYAVRVQVLRYRDLEYNLASQTLGTPTYKIVSKNLLPQLVSVIVSMVSLLLPAYIS
SEAFLSFFGLGLPLSEPSLGRLISNYSSYLTTNAYLFWIPLTTLILVSLPLYIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1064014 ACG3JL_RS01680 WP_041828589.1 315730..316656(+) (amiD) [Streptococcus parauberis strain DB-M18]
ATGGCATCTATAGATAAAAGCAAGTTCGAATTTGTCGAACTAGATAGTTATGCATCAGAAGTCATTGATGCCCCTTCCTA
TTCATACTGGAAATCAGTATTTAGACAATTCTTTTCACGTAAATCTACTATTGTAATGTTAGTTATTTTAATTGCAATCA
TCCTAATGAGTTTTGTATATCCGATGTTTGCTAACTATGACTTTGGTGATGTGACAAACATTAATGATTTCTCTAAACGC
TATATCTCTCCAAATGGGGAATATTGGTTTGGTACAGACAAAAATGGTCAGTCACTCTTTGATGGTGTTTGGTATGGTGC
TAGAAACTCGATCCTAATTTCCGTTATTGCTACAGCAATCAATATGATTGTTGGGGTAGTTGTTGGTGGCCTTTGGGGAG
TTTCAAAAGCAGTTGATAAGGTAATGATTGAAGTCTACAATGTTATTTCTAACTTACCTCAAATGCTTATCATTATTGTC
TTAACTTATTCAATTGGTGCTGGTTTCTGGAACCTTATCTTTGCCTTCTGTGTAACTGGATGGATAGGGATTGCTTATGC
TGTCCGTGTCCAAGTACTCCGTTACCGTGATTTAGAGTATAACTTAGCCAGTCAAACACTAGGAACACCAACTTACAAAA
TTGTATCCAAAAATTTATTACCACAGTTAGTTTCTGTTATTGTATCAATGGTTTCTCTTTTGTTACCAGCCTACATTTCA
TCAGAAGCCTTCTTATCATTTTTTGGTTTAGGATTACCATTGTCAGAACCAAGTTTAGGCCGTTTGATTTCAAATTATTC
ATCATATTTGACAACAAACGCTTACCTATTCTGGATTCCATTAACTACTCTTATTCTAGTATCTCTTCCACTTTATATAG
TTGGACAAAACTTAGCAGATGCTAGTGACCCAAGAACACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.377	100	0.734
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727