Detailed information NTG1063969

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ACG3JE_RS01690
• Genome accession: NZ_CP171736
• Coordinates: 315681..316607 (+)
• Length: 308 a.a.
• NCBI ID: WP_041828589.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M17
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 310681..321607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JE_RS01680 (ACG3JE_01680)	amiA3	312135..314114 (+)	1980	WP_013794304.1	peptide ABC transporter substrate-binding protein	Regulator
ACG3JE_RS01685 (ACG3JE_01685)	amiC	314182..315681 (+)	1500	WP_013794303.1	ABC transporter permease	Regulator
ACG3JE_RS01690 (ACG3JE_01690)	amiD	315681..316607 (+)	927	WP_041828589.1	oligopeptide ABC transporter permease OppC	Regulator
ACG3JE_RS01695 (ACG3JE_01695)	-	316616..317697 (+)	1082	Protein_313	ABC transporter ATP-binding protein	-
ACG3JE_RS01700 (ACG3JE_01700)	-	317690..318633 (+)	944	Protein_314	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34445.20 Da
• Isoelectric Point: 6.9724

>NTDB_id=1063969 ACG3JE_RS01690 WP_041828589.1 315681..316607(+) (amiD) [Streptococcus parauberis strain DB-M17]
MASIDKSKFEFVELDSYASEVIDAPSYSYWKSVFRQFFSRKSTIVMLVILIAIILMSFVYPMFANYDFGDVTNINDFSKR
YISPNGEYWFGTDKNGQSLFDGVWYGARNSILISVIATAINMIVGVVVGGLWGVSKAVDKVMIEVYNVISNLPQMLIIIV
LTYSIGAGFWNLIFAFCVTGWIGIAYAVRVQVLRYRDLEYNLASQTLGTPTYKIVSKNLLPQLVSVIVSMVSLLLPAYIS
SEAFLSFFGLGLPLSEPSLGRLISNYSSYLTTNAYLFWIPLTTLILVSLPLYIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1063969 ACG3JE_RS01690 WP_041828589.1 315681..316607(+) (amiD) [Streptococcus parauberis strain DB-M17]
ATGGCATCTATAGATAAAAGCAAGTTCGAATTTGTCGAACTAGATAGTTATGCATCAGAAGTCATTGATGCCCCTTCCTA
TTCATACTGGAAATCAGTATTTAGACAATTCTTTTCACGTAAATCTACTATTGTAATGTTAGTTATTTTAATTGCAATCA
TCCTAATGAGTTTTGTATATCCGATGTTTGCTAACTATGACTTTGGTGATGTGACAAACATTAATGATTTCTCTAAACGC
TATATCTCTCCAAATGGGGAATATTGGTTTGGTACAGACAAAAATGGTCAGTCACTCTTTGATGGTGTTTGGTATGGTGC
TAGAAACTCGATCCTAATTTCCGTTATTGCTACAGCAATCAATATGATTGTTGGGGTAGTTGTTGGTGGCCTTTGGGGAG
TTTCAAAAGCAGTTGATAAGGTAATGATTGAAGTCTACAATGTTATTTCTAACTTACCTCAAATGCTTATCATTATTGTC
TTAACTTATTCAATTGGTGCTGGTTTCTGGAACCTTATCTTTGCCTTCTGTGTAACTGGATGGATAGGGATTGCTTATGC
TGTCCGTGTCCAAGTACTCCGTTACCGTGATTTAGAGTATAACTTAGCCAGTCAAACACTAGGAACACCAACTTACAAAA
TTGTATCCAAAAATTTATTACCACAGTTAGTTTCTGTTATTGTATCAATGGTTTCTCTTTTGTTACCAGCCTACATTTCA
TCAGAAGCCTTCTTATCATTTTTTGGTTTAGGATTACCATTGTCAGAACCAAGTTTAGGCCGTTTGATTTCAAATTATTC
ATCATATTTGACAACAAACGCTTACCTATTCTGGATTCCATTAACTACTCTTATTCTAGTATCTCTTCCACTTTATATAG
TTGGACAAAACTTAGCAGATGCTAGTGACCCAAGAACACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.377	100	0.734
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727