Detailed information NTG1063858

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ACG3JI_RS00235
• Genome accession: NZ_CP171734
• Coordinates: 47139..48065 (+)
• Length: 308 a.a.
• NCBI ID: WP_041828589.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M9
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 42139..53065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JI_RS00225 (ACG3JI_00225)	amiA3	43593..45572 (+)	1980	WP_013794304.1	peptide ABC transporter substrate-binding protein	Regulator
ACG3JI_RS00230 (ACG3JI_00230)	amiC	45640..47139 (+)	1500	WP_013794303.1	ABC transporter permease	Regulator
ACG3JI_RS00235 (ACG3JI_00235)	amiD	47139..48065 (+)	927	WP_041828589.1	oligopeptide ABC transporter permease OppC	Regulator
ACG3JI_RS00240 (ACG3JI_00240)	-	48074..49155 (+)	1082	Protein_40	ABC transporter ATP-binding protein	-
ACG3JI_RS00245 (ACG3JI_00245)	amiF	49148..50092 (+)	945	WP_003104982.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34445.20 Da
• Isoelectric Point: 6.9724

>NTDB_id=1063858 ACG3JI_RS00235 WP_041828589.1 47139..48065(+) (amiD) [Streptococcus parauberis strain DB-M9]
MASIDKSKFEFVELDSYASEVIDAPSYSYWKSVFRQFFSRKSTIVMLVILIAIILMSFVYPMFANYDFGDVTNINDFSKR
YISPNGEYWFGTDKNGQSLFDGVWYGARNSILISVIATAINMIVGVVVGGLWGVSKAVDKVMIEVYNVISNLPQMLIIIV
LTYSIGAGFWNLIFAFCVTGWIGIAYAVRVQVLRYRDLEYNLASQTLGTPTYKIVSKNLLPQLVSVIVSMVSLLLPAYIS
SEAFLSFFGLGLPLSEPSLGRLISNYSSYLTTNAYLFWIPLTTLILVSLPLYIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1063858 ACG3JI_RS00235 WP_041828589.1 47139..48065(+) (amiD) [Streptococcus parauberis strain DB-M9]
ATGGCATCTATAGATAAAAGCAAGTTCGAATTTGTCGAACTAGATAGTTATGCATCAGAAGTCATTGATGCCCCTTCCTA
TTCATACTGGAAATCAGTATTTAGACAATTCTTTTCACGTAAATCTACTATTGTAATGTTAGTTATTTTAATTGCAATCA
TCCTAATGAGTTTTGTATATCCGATGTTTGCTAACTATGACTTTGGTGATGTGACAAACATTAATGATTTCTCTAAACGC
TATATCTCTCCAAATGGGGAATATTGGTTTGGTACAGACAAAAATGGTCAGTCACTCTTTGATGGTGTTTGGTATGGTGC
TAGAAACTCGATCCTAATTTCCGTTATTGCTACAGCAATCAATATGATTGTTGGGGTAGTTGTTGGTGGCCTTTGGGGAG
TTTCAAAAGCAGTTGATAAGGTAATGATTGAAGTCTACAATGTTATTTCTAACTTACCTCAAATGCTTATCATTATTGTC
TTAACTTATTCAATTGGTGCTGGTTTCTGGAACCTTATCTTTGCCTTCTGTGTAACTGGATGGATAGGGATTGCTTATGC
TGTCCGTGTCCAAGTACTCCGTTACCGTGATTTAGAGTATAACTTAGCCAGTCAAACACTAGGAACACCAACTTACAAAA
TTGTATCCAAAAATTTATTACCACAGTTAGTTTCTGTTATTGTATCAATGGTTTCTCTTTTGTTACCAGCCTACATTTCA
TCAGAAGCCTTCTTATCATTTTTTGGTTTAGGATTACCATTGTCAGAACCAAGTTTAGGCCGTTTGATTTCAAATTATTC
ATCATATTTGACAACAAACGCTTACCTATTCTGGATTCCATTAACTACTCTTATTCTAGTATCTCTTCCACTTTATATAG
TTGGACAAAACTTAGCAGATGCTAGTGACCCAAGAACACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.377	100	0.734
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727