Detailed information NTG1063850

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ACG3JJ_RS10055
• Genome accession: NZ_CP171733
• Coordinates: 1967125..1968069 (-)
• Length: 314 a.a.
• NCBI ID: WP_003104982.1
• Uniprot ID: A0AAE4HY29
• Organism: Streptococcus parauberis strain DB-M5
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1962125..1973069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JJ_RS10055 (ACG3JJ_10055)	amiF	1967125..1968069 (-)	945	WP_003104982.1	ATP-binding cassette domain-containing protein	Regulator
ACG3JJ_RS10060 (ACG3JJ_10060)	-	1968062..1969143 (-)	1082	Protein_1937	ABC transporter ATP-binding protein	-
ACG3JJ_RS10065 (ACG3JJ_10065)	amiD	1969152..1970078 (-)	927	WP_041828589.1	oligopeptide ABC transporter permease OppC	Regulator
ACG3JJ_RS10070 (ACG3JJ_10070)	amiC	1970078..1971577 (-)	1500	WP_013794303.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 35745.06 Da
• Isoelectric Point: 6.9314

>NTDB_id=1063850 ACG3JJ_RS10055 WP_003104982.1 1967125..1968069(-) (amiF) [Streptococcus parauberis strain DB-M5]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINRGETFSLVGESGSGKTTIGRAIIGLNDTSSGEIIYDGKQINKKKSNS
EREELIKKIQMIFQDPAASLNERATVDYIISEGLYNHKLFKSEEERKDKIKNMMTEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMDPEFIIADEPISALDVSVRAQVLNLLKRMQREKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFI
NPVHPYTKSLLSAVPIPDPILERQKKLLVYNVDQHDYTVDKPEMVEIQPGHFVWANKLETEKYKKEIADRQQSN

Nucleotide

• Length: 945 bp

>NTDB_id=1063850 ACG3JJ_RS10055 WP_003104982.1 1967125..1968069(-) (amiF) [Streptococcus parauberis strain DB-M5]
ATGTCTGAGAAGCTAGTTGAAGTCAAAGACTTAGAAATTTCCTTCGGTGAAGGAAAGAAAAAATTTGTTGCTGTTAAAAA
TGCCAATTTCTTTATTAATCGAGGGGAAACTTTTTCTTTGGTTGGTGAGTCAGGAAGTGGGAAAACAACAATTGGGCGTG
CTATCATTGGTTTAAATGATACGAGTTCAGGTGAAATCATTTATGATGGTAAACAAATCAATAAGAAAAAAAGTAATTCA
GAACGTGAAGAATTAATTAAAAAGATTCAAATGATCTTTCAAGATCCAGCAGCAAGTTTGAATGAACGTGCAACTGTTGA
CTATATTATTTCTGAAGGACTATACAATCATAAACTGTTCAAAAGTGAAGAAGAACGTAAAGATAAAATCAAAAACATGA
TGACAGAAGTTGGACTTTTGTCTGAACATTTAACACGTTATCCTCATGAATTTTCAGGTGGACAACGTCAGCGTATCGGG
ATTGCGCGTGCTTTAGTTATGGATCCAGAATTCATTATTGCTGATGAGCCTATCTCGGCTCTAGACGTTTCGGTTCGAGC
TCAGGTGCTAAATCTTCTAAAACGGATGCAAAGAGAAAAAGGTTTAACTTATCTCTTTATTGCCCATGATTTATCAGTAG
TTCGGTTCATATCTGATCGAATCGCAGTTATTCATAAAGGTGTTATTGTAGAAGTAGCTGAAACTGAAGAATTATTTATC
AATCCAGTTCATCCATATACTAAATCTCTATTATCCGCTGTACCGATTCCGGATCCAATTTTGGAAAGACAGAAGAAACT
TCTTGTCTATAACGTTGATCAGCATGACTATACAGTTGACAAACCAGAAATGGTAGAAATCCAACCAGGTCATTTCGTTT
GGGCGAATAAATTAGAAACAGAGAAATATAAAAAGGAAATTGCTGATAGACAGCAGTCCAACTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.699	97.452	0.796
amiF	Streptococcus thermophilus LMD-9	81.373	97.452	0.793
amiF	Streptococcus salivarius strain HSISS4	81.046	97.452	0.79