Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACG3JJ_RS09000 Genome accession   NZ_CP171733
Coordinates   1783388..1784197 (-) Length   269 a.a.
NCBI ID   WP_037619792.1    Uniprot ID   A0AAE4L2Y1
Organism   Streptococcus parauberis strain DB-M5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1778388..1789197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JJ_RS08990 (ACG3JJ_08990) smc 1779052..1782597 (-) 3546 WP_071519695.1 chromosome segregation protein SMC -
  ACG3JJ_RS08995 (ACG3JJ_08995) rnc 1782598..1783290 (-) 693 WP_003103277.1 ribonuclease III -
  ACG3JJ_RS09000 (ACG3JJ_09000) vicX 1783388..1784197 (-) 810 WP_037619792.1 MBL fold metallo-hydrolase Regulator
  ACG3JJ_RS09005 (ACG3JJ_09005) vicK 1784202..1785563 (-) 1362 WP_004234616.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACG3JJ_RS09010 (ACG3JJ_09010) vicR 1785556..1786266 (-) 711 WP_013793732.1 response regulator YycF Regulator
  ACG3JJ_RS09015 (ACG3JJ_09015) - 1786514..1787293 (+) 780 WP_003106355.1 amino acid ABC transporter ATP-binding protein -
  ACG3JJ_RS09020 (ACG3JJ_09020) - 1787306..1788121 (+) 816 WP_013793731.1 transporter substrate-binding domain-containing protein -
  ACG3JJ_RS09025 (ACG3JJ_09025) - 1788135..1788839 (+) 705 WP_003104614.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30296.19 Da        Isoelectric Point: 5.7226

>NTDB_id=1063842 ACG3JJ_RS09000 WP_037619792.1 1783388..1784197(-) (vicX) [Streptococcus parauberis strain DB-M5]
MENFGFKYSILASGSTGNSFYLETPKQKILVDAGLTGKKMTSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHLD
IYANQNTWKIIDDRNMIGKIDSEHKHIFDRDKVMTFGDIDIESFGVSHDAHDPQFYRFMKDNKSFVMLTDTGYVSDRMSG
IIENADGYLIESNHDIEILRSGGYPWSLKQRILSDRGHLSNEDGAQAMIRSMGNATKKIYLGHLSKENNIKELAHMTMEN
QLAMADLAVGSDFKVYDTSPDTASPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1063842 ACG3JJ_RS09000 WP_037619792.1 1783388..1784197(-) (vicX) [Streptococcus parauberis strain DB-M5]
ATGGAGAATTTTGGATTTAAATATAGTATATTAGCCTCTGGTTCAACAGGAAACAGTTTTTACTTGGAAACACCAAAGCA
AAAGATTTTGGTCGATGCAGGACTCACTGGTAAAAAAATGACAAGTCTCTTAGCTGAGATTGATCGGAAACCTGAAGATT
TAGATGCTATCTTGATTACACATGAACATTCTGACCATATTAAAGGTGTCGGGGTATTGGCTAGAAAATATCATTTAGAT
ATCTATGCTAATCAAAATACTTGGAAAATAATTGATGACCGCAATATGATTGGCAAAATTGATTCCGAACACAAACATAT
CTTTGATCGGGATAAAGTCATGACTTTTGGTGATATTGATATTGAAAGTTTTGGGGTTAGTCATGATGCCCATGATCCGC
AGTTTTATCGTTTTATGAAGGATAACAAATCCTTTGTCATGTTGACTGATACTGGTTACGTCTCGGATCGCATGTCGGGA
ATTATTGAAAATGCTGATGGTTACTTGATTGAATCAAATCATGACATCGAAATTTTAAGATCTGGTGGCTATCCTTGGAG
CTTAAAACAACGTATATTGTCTGATAGAGGGCATTTATCTAACGAAGATGGTGCACAAGCTATGATACGAAGTATGGGAA
ATGCTACTAAGAAGATTTATCTTGGACATTTGAGTAAAGAAAATAATATCAAAGAGTTGGCTCATATGACGATGGAAAAT
CAACTAGCTATGGCAGACTTAGCTGTCGGTTCTGATTTCAAAGTCTACGATACCTCCCCTGATACGGCTAGTCCTTTGAC
AGATATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment