Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACG3JF_RS04340 Genome accession   NZ_CP171732
Coordinates   887718..888443 (-) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis strain DB-M3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 882718..893443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JF_RS04305 (ACG3JF_04305) rnpM 882763..883059 (-) 297 WP_003104517.1 RNase P modulator RnpM -
  ACG3JF_RS04310 (ACG3JF_04310) nusA 883075..884229 (-) 1155 WP_013793668.1 transcription termination factor NusA -
  ACG3JF_RS04315 (ACG3JF_04315) rimP 884318..884800 (-) 483 WP_003102760.1 ribosome maturation factor RimP -
  ACG3JF_RS04325 (ACG3JF_04325) trmB 885194..885829 (-) 636 WP_003107546.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACG3JF_RS04330 (ACG3JF_04330) ccrZ 885829..886620 (-) 792 WP_003107547.1 cell cycle regulator CcrZ -
  ACG3JF_RS04335 (ACG3JF_04335) - 886681..887715 (-) 1035 WP_013793667.1 ABC transporter permease -
  ACG3JF_RS04340 (ACG3JF_04340) pptA 887718..888443 (-) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  ACG3JF_RS04345 (ACG3JF_04345) - 888705..889124 (+) 420 WP_003103589.1 HIT family protein -
  ACG3JF_RS04350 (ACG3JF_04350) - 889121..889423 (+) 303 WP_003104696.1 hypothetical protein -
  ACG3JF_RS04355 (ACG3JF_04355) brpA 889456..890745 (-) 1290 WP_013793666.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACG3JF_RS04360 (ACG3JF_04360) - 890754..891278 (-) 525 WP_013793665.1 GNAT family N-acetyltransferase -
  ACG3JF_RS04365 (ACG3JF_04365) tsaE 891265..891714 (-) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACG3JF_RS04370 (ACG3JF_04370) - 891803..893263 (-) 1461 WP_003104259.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=1063769 ACG3JF_RS04340 WP_003105648.1 887718..888443(-) (pptA) [Streptococcus parauberis strain DB-M3]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1063769 ACG3JF_RS04340 WP_003105648.1 887718..888443(-) (pptA) [Streptococcus parauberis strain DB-M3]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACGCACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722

Multiple sequence alignment