NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	EG65_RS01340	Genome accession	NZ_CP007603
Coordinates	271138..273708 (+)	Length	856 a.a.
NCBI ID	WP_026937942.1	Uniprot ID	-
Organism	Helicobacter pylori J166
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 266138..278708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG65_RS01315 (EG65_01360)	xseA	266374..267636 (+)	1263	WP_000558304.1	exodeoxyribonuclease VII large subunit	-
EG65_RS01320 (EG65_01365)	-	267655..268809 (-)	1155	WP_013195916.1	DNA methyltransferase	-
EG65_RS01325 (EG65_01370)	-	268838..269434 (-)	597	WP_001861164.1	hypothetical protein	-
EG65_RS01330 (EG65_01375)	-	269621..270310 (+)	690	Protein_250	BsaWI family type II restriction enzyme	-
EG65_RS01335 (EG65_01380)	-	270307..271065 (+)	759	WP_026937941.1	DNA-methyltransferase	-
EG65_RS01340 (EG65_01385)	clpC	271138..273708 (+)	2571	WP_026937942.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
EG65_RS01345 (EG65_01390)	-	273765..274484 (+)	720	WP_001875579.1	cytochrome c biogenesis protein CcdA	-
EG65_RS01350 (EG65_01395)	-	274494..275630 (+)	1137	WP_026937943.1	amidohydrolase family protein	-
EG65_RS01355 (EG65_01400)	mqnF	275615..276844 (+)	1230	WP_026937944.1	aminofutalosine deaminase family hydrolase	-
EG65_RS01360 (EG65_01405)	-	276905..277147 (+)	243	WP_000780061.1	nuclease	-
EG65_RS01365 (EG65_01410)	miaB	277157..278470 (+)	1314	WP_026937945.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	-

Sequence

Protein

Download Length: 856 a.a. Molecular weight: 96689.64 Da Isoelectric Point: 6.2215

                                >NTDB_id=106375 EG65_RS01340 WP_026937942.1 271138..273708(+) (clpC) [Helicobacter pylori J166]

MNLFEKMTDQLHEALDSALALALHHKNAEVTPLHMLFVMLNNSQGILIQALQKMPVDIEALKLSVQSELNKFAKVSQISK

QNIQLNQALIQSLENAQGLMAKRGDSFIATDVYLLANMSLFESVLKPYLDTKELQKTLESLRKGRTIQDKNDDSNLESLE

KFGIDLTQKALDNKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVIALDL

SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYF

EKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM

QMESEPAKLSSVKRSIQRLEMEKQALEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEMESLK

KEAERFKRNGDYQQAGEIEYSKIPENKKKEEELQHKWETMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVL

NIESELQKRVVGQEKAIKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEK

HAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV

ASGALLEEDLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVGILFENVQKKALERGINITLDEKAKEL

IAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENDSVVFVVENNEIVPKIK

Nucleotide

Download Length: 2571 bp

                                >NTDB_id=106375 EG65_RS01340 WP_026937942.1 271138..273708(+) (clpC) [Helicobacter pylori J166]

ATGAATTTATTTGAAAAAATGACTGACCAATTGCATGAGGCTTTAGACAGCGCGCTCGCTTTAGCTTTACACCATAAAAA

CGCTGAAGTAACGCCCTTGCACATGCTTTTTGTCATGCTCAATAACTCCCAAGGCATCCTCATTCAAGCCTTACAAAAAA

TGCCTGTGGATATTGAAGCTTTAAAACTTAGCGTTCAAAGCGAGTTGAATAAGTTCGCTAAAGTTTCACAAATCAGCAAG

CAAAATATCCAATTAAACCAAGCTCTAATCCAAAGTTTAGAAAACGCTCAAGGCTTGATGGCTAAAAGGGGCGATTCTTT

CATCGCTACCGATGTGTATCTTTTGGCGAATATGAGCCTTTTTGAAAGCGTTTTAAAGCCTTATTTAGACACTAAGGAAT

TGCAAAAAACTTTAGAATCTTTAAGAAAAGGCAGGACTATTCAGGATAAAAACGATGATTCTAATTTGGAAAGTTTGGAA

AAATTTGGCATTGATTTGACGCAAAAAGCCTTAGACAATAAGCTGGATCCGGTGATCGGAAGAGATGAAGAAATCATTCG

CATGATGCAAATTTTGATCAGAAAAACAAAAAATAACCCTATTTTATTGGGTGAGCCTGGAGTGGGGAAAACGGCGGTTG

TGGAAGGGTTAGCCCAACGCATTGTGAATAAAGAAGTGCCTAAAACGCTTTTAAACAAACGAGTTATCGCTTTAGACTTA

AGCTTATTGGTGGCTGGGGCGAAATACAGAGGCGAGTTTGAAGAGCGCCTGAAAAAGGTGATTGAAGAAGTTAAAAAAAG

TGCGAATGTGATTTTATTCATTGATGAAATCCACACGATTGTGGGGGCTGGGGCTAGTGAGGGGGGCATGGATGCGGCTA

ATATTTTAAAACCCGCGCTCGCTAGGGGGGAATTGCACACGATTGGAGCGACCACTTTAAAAGAATACCGCAAGTATTTT

GAAAAAGACATGGCGCTACAAAGGCGTTTCCAACCCATTTTACTCAATGAGCCTAGCATTAATGAAGCTTTACAGATTTT

AAGGGGGTTGAAAGAAACTTTAGAAACGCACCATAATATCACTATCAATGACTCCGCGCTCATAGCGAGCGCTAAACTCT

CTAGCCGTTATATCACCGATAGGTTTTTACCCGATAAAGCGATTGATTTGATTGATGAGGGGGCGGCTCAATTAAAAATG

CAAATGGAATCAGAGCCGGCAAAACTTTCCAGCGTTAAGCGCTCCATTCAAAGACTGGAAATGGAAAAACAAGCCCTTGA

AATGGAAAAAAAAGAAAGCAATGCCAAACGCATGCAAGAAATCCTTAAAGAATTGAGCGATTTGAAAGAAGAAAAAATCC

AATTAGAAGCGCAATTTGAAAACGAAAAAGAAGTGTTCAAAGAAATTTCACGCTTGAAAATGGAAATGGAAAGCTTGAAA

AAAGAGGCTGAGAGGTTTAAACGCAATGGGGATTACCAGCAAGCGGGTGAAATTGAATACTCTAAAATCCCTGAAAATAA

AAAGAAAGAAGAAGAATTGCAGCACAAATGGGAAACGATGCAACAAAACGGGGCGTTGTTGCAAAACGCTTTAACCGAAA

ACAACATCGCTGAGATCGTGAGCCAATGGACGCATATCCCGGTCCAAAAAATGCTCCAAAGCGAAAAAAATAGGGTTTTA

AACATTGAAAGCGAATTGCAAAAAAGGGTGGTGGGGCAAGAAAAAGCAATCAAAGCGATCGCTAAAGCGATTAAAAGGAA

TAAGGCCGGGCTTAGCGATAGCAACAAGCCCATAGGGAGTTTCCTCTTTTTAGGGCCAACAGGCGTGGGTAAAACCGAGA

GCGCTAAAGCTTTGGCGCAATTCTTGTTTGATAGCGATAAAAATCTTATAAGAATTGACATGAGCGAATATATGGAAAAG

CATGCCATAAGCCGTCTTATTGGGGCTGCTCCTGGGTATGTGGGCTATGAAGAAGGCGGGCAATTGACCGAAGCGGTGCG

CAGAAAGCCTTATAGCGTGGTGTTATTAGATGAAGTGGAAAAAGCCCATCCGGATGTGTTTAACCTCTTGTTGCAGGTTT

TAGATGAAGGGCATTTAACCGATAGTAAGGGCGTGAGGGTGGATTTCAAAAACACGATTTTGATTTTAACCAGCAATGTG

GCTAGCGGCGCGCTTTTAGAAGAGGATTTGAGTGAAGCCGATAAACAAAAAGCGATTAAAGAGAGCCTGAGGCAATTTTT

CAAGCCGGAATTTTTAAACCGATTAGATGAAATCATCTCCTTTAACGCCCTAGATAGTCATGCTATCATCAATATCGTGG

GGATACTCTTTGAAAACGTTCAAAAAAAAGCGCTTGAAAGGGGCATTAATATAACCCTAGACGAAAAAGCGAAAGAATTG

ATCGCCGAAGCGGGGTTTGACAGATTCTATGGCGCTAGACCCCTAAAGCGCGCGCTCTATGAAATGGTAGAAGACAAGCT

CGCTGAACTCATTTTGGAGGATAAAATTAAAGAGAATGACAGCGTGGTGTTTGTGGTAGAAAATAACGAGATTGTGCCTA

AGATTAAGTGA