Detailed information NTG1063345

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACGLYC_RS01980
• Genome accession: NZ_CP171691
• Coordinates: 392582..393730 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain K12
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 387582..398730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGLYC_RS01960 (ACGLYC_01960)	-	388003..388686 (-)	684	WP_032866951.1	ABC transporter ATP-binding protein	-
ACGLYC_RS01965 (ACGLYC_01965)	-	388701..390113 (-)	1413	WP_020955321.1	ABC transporter permease	-
ACGLYC_RS01970 (ACGLYC_01970)	-	390326..391009 (+)	684	WP_007410267.1	response regulator transcription factor	-
ACGLYC_RS01975 (ACGLYC_01975)	-	390996..392429 (+)	1434	WP_020955322.1	ATP-binding protein	-
ACGLYC_RS01980 (ACGLYC_01980)	rapC	392582..393730 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
ACGLYC_RS01985 (ACGLYC_01985)	phrC	393714..393833 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACGLYC_RS01990 (ACGLYC_01990)	-	393983..394093 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
ACGLYC_RS01995 (ACGLYC_01995)	-	394173..395537 (-)	1365	WP_032866947.1	aspartate kinase	-
ACGLYC_RS02000 (ACGLYC_02000)	ceuB	395951..396904 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
ACGLYC_RS02005 (ACGLYC_02005)	-	396894..397841 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
ACGLYC_RS02010 (ACGLYC_02010)	-	397835..398593 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1063345 ACGLYC_RS01980 WP_007410270.1 392582..393730(+) (rapC) [Bacillus velezensis strain K12]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1063345 ACGLYC_RS01980 WP_007410270.1 392582..393730(+) (rapC) [Bacillus velezensis strain K12]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCAGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568