Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8J0_RS15705 Genome accession   NZ_CP171591
Coordinates   3230144..3230740 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP03_UID2108280003     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3225144..3235740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8J0_RS15685 - 3225337..3227094 (-) 1758 WP_004147851.1 Lon protease family protein -
  ACF8J0_RS15690 matP 3227280..3227732 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8J0_RS15695 ompA 3227863..3228933 (-) 1071 WP_002898408.1 porin OmpA -
  ACF8J0_RS15700 sulA 3229286..3229795 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  ACF8J0_RS15705 sxy/tfoX 3230144..3230740 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8J0_RS15710 yccS 3230754..3232889 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8J0_RS15715 - 3232907..3233353 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8J0_RS15720 helD 3233478..3235532 (+) 2055 WP_009485779.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1062245 ACF8J0_RS15705 WP_004179217.1 3230144..3230740(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP03_UID2108280003]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1062245 ACF8J0_RS15705 WP_004179217.1 3230144..3230740(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP03_UID2108280003]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTATTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment