Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8JG_RS23975 Genome accession   NZ_CP171559
Coordinates   4784770..4785366 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KP17_UID2108280013     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4779770..4790366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8JG_RS23960 helD 4779978..4782032 (-) 2055 WP_023342915.1 DNA helicase IV -
  ACF8JG_RS23965 - 4782157..4782603 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8JG_RS23970 yccS 4782621..4784756 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8JG_RS23975 sxy/tfoX 4784770..4785366 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8JG_RS23980 sulA 4785715..4786224 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACF8JG_RS23985 ompA 4786576..4787646 (+) 1071 WP_002898408.1 porin OmpA -
  ACF8JG_RS23990 matP 4787777..4788229 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8JG_RS23995 - 4788415..4790172 (+) 1758 WP_032414743.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1062036 ACF8JG_RS23975 WP_004150836.1 4784770..4785366(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP17_UID2108280013]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1062036 ACF8JG_RS23975 WP_004150836.1 4784770..4785366(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP17_UID2108280013]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment