Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8KD_RS15305 Genome accession   NZ_CP171542
Coordinates   3166709..3167305 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KP20_UID2108280016     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3161709..3172305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8KD_RS15285 - 3161897..3163654 (-) 1758 WP_004147851.1 Lon protease family protein -
  ACF8KD_RS15290 matP 3163840..3164292 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8KD_RS15295 ompA 3164423..3165499 (-) 1077 WP_032432880.1 porin OmpA -
  ACF8KD_RS15300 sulA 3165851..3166360 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACF8KD_RS15305 sxy/tfoX 3166709..3167305 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8KD_RS15310 yccS 3167319..3169454 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8KD_RS15315 - 3169472..3169918 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8KD_RS15320 helD 3170043..3172097 (+) 2055 WP_040147912.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1061960 ACF8KD_RS15305 WP_004150836.1 3166709..3167305(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP20_UID2108280016]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1061960 ACF8KD_RS15305 WP_004150836.1 3166709..3167305(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP20_UID2108280016]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment