Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   DK43_RS09895 Genome accession   NZ_CP007573
Coordinates   24271..24417 (+) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain SA1     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 19271..29417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS00090 (DK43_00095) dnaA 19734..21077 (-) 1344 WP_003029515.1 chromosomal replication initiator protein DnaA -
  DK43_RS00095 (DK43_00100) spo0J 21305..22072 (-) 768 WP_003029516.1 ParB/RepB/Spo0J family partition protein Regulator
  DK43_RS00100 (DK43_00105) htrA 22127..23317 (-) 1191 WP_003029517.1 trypsin-like peptidase domain-containing protein Regulator
  DK43_RS00105 (DK43_00110) rlmH 23510..23989 (+) 480 WP_003029518.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DK43_RS09895 (DK43_00120) comC 24271..24417 (+) 147 WP_003029519.1 bacteriocin Regulator
  DK43_RS00120 (DK43_00125) comD/comD2 24435..25760 (+) 1326 WP_218015592.1 GHKL domain-containing protein Regulator
  DK43_RS00125 (DK43_00130) comE 25760..26509 (+) 750 WP_003029521.1 competence system response regulator transcription factor ComE Regulator
  DK43_RS09900 (DK43_00145) - 26978..27811 (+) 834 WP_022525263.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=106191 DK43_RS09895 WP_003029519.1 24271..24417(+) (comC) [Streptococcus anginosus strain SA1]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=106191 DK43_RS09895 WP_003029519.1 24271..24417(+) (comC) [Streptococcus anginosus strain SA1]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396

Multiple sequence alignment