Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8JX_RS14015 Genome accession   NZ_CP171523
Coordinates   2844297..2844893 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP26_UID2108280022     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2839297..2849893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8JX_RS14000 helD 2839505..2841559 (-) 2055 WP_004179218.1 DNA helicase IV -
  ACF8JX_RS14005 - 2841684..2842130 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8JX_RS14010 yccS 2842148..2844283 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8JX_RS14015 sxy/tfoX 2844297..2844893 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8JX_RS14020 sulA 2845242..2845751 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  ACF8JX_RS14025 ompA 2846104..2847174 (+) 1071 WP_002898408.1 porin OmpA -
  ACF8JX_RS14030 matP 2847306..2847758 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8JX_RS14035 - 2847944..2849692 (+) 1749 WP_395165231.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1061835 ACF8JX_RS14015 WP_004179217.1 2844297..2844893(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP26_UID2108280022]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1061835 ACF8JX_RS14015 WP_004179217.1 2844297..2844893(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP26_UID2108280022]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment