Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8JO_RS10700 Genome accession   NZ_CP171521
Coordinates   2130374..2130970 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP27_UID2108280023     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2125374..2135970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8JO_RS10685 helD 2125582..2127636 (-) 2055 WP_004176653.1 DNA helicase IV -
  ACF8JO_RS10690 - 2127761..2128207 (+) 447 WP_021312905.1 YccF domain-containing protein -
  ACF8JO_RS10695 yccS 2128225..2130360 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8JO_RS10700 sxy/tfoX 2130374..2130970 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8JO_RS10705 sulA 2131319..2131828 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACF8JO_RS10710 ompA 2132181..2133251 (+) 1071 WP_002898408.1 porin OmpA -
  ACF8JO_RS10715 matP 2133382..2133834 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8JO_RS10720 - 2134020..2135777 (+) 1758 WP_395164646.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1061803 ACF8JO_RS10700 WP_004179217.1 2130374..2130970(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP27_UID2108280023]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1061803 ACF8JO_RS10700 WP_004179217.1 2130374..2130970(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP27_UID2108280023]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment