Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8J6_RS10380 Genome accession   NZ_CP171497
Coordinates   2119186..2119782 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP37_UID2108280033     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2114186..2124782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8J6_RS10365 helD 2114394..2116448 (-) 2055 WP_301692304.1 DNA helicase IV -
  ACF8J6_RS10370 - 2116573..2117019 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8J6_RS10375 yccS 2117037..2119172 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8J6_RS10380 sxy/tfoX 2119186..2119782 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8J6_RS10385 sulA 2120131..2120640 (+) 510 WP_004893150.1 SOS-induced cell division inhibitor SulA -
  ACF8J6_RS10390 ompA 2120993..2122069 (+) 1077 WP_032432880.1 porin OmpA -
  ACF8J6_RS10395 matP 2122201..2122653 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8J6_RS10400 - 2122839..2124596 (+) 1758 WP_062920818.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1061617 ACF8J6_RS10380 WP_004179217.1 2119186..2119782(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP37_UID2108280033]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1061617 ACF8J6_RS10380 WP_004179217.1 2119186..2119782(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP37_UID2108280033]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment