Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8J2_RS25545 Genome accession   NZ_CP171495
Coordinates   5234108..5234704 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain KP38_UID2108280034     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 5229108..5239704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8J2_RS25525 - 5229300..5231057 (-) 1758 WP_032414743.1 Lon protease family protein -
  ACF8J2_RS25530 matP 5231243..5231695 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8J2_RS25535 ompA 5231827..5232897 (-) 1071 WP_002898408.1 porin OmpA -
  ACF8J2_RS25540 sulA 5233250..5233759 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACF8J2_RS25545 sxy/tfoX 5234108..5234704 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8J2_RS25550 yccS 5234718..5236853 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8J2_RS25555 - 5236871..5237317 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8J2_RS25560 helD 5237442..5239496 (+) 2055 WP_032103554.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1061613 ACF8J2_RS25545 WP_004150836.1 5234108..5234704(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP38_UID2108280034]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1061613 ACF8J2_RS25545 WP_004150836.1 5234108..5234704(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP38_UID2108280034]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment