Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   DK43_RS07520 Genome accession   NZ_CP007573
Coordinates   1565838..1566524 (-) Length   228 a.a.
NCBI ID   WP_022525182.1    Uniprot ID   A0ABD7NE66
Organism   Streptococcus anginosus strain SA1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1560838..1571524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS07500 (DK43_07690) - 1561054..1563030 (-) 1977 WP_003028299.1 FtsX-like permease family protein -
  DK43_RS07505 (DK43_07695) - 1563011..1563790 (-) 780 WP_022525183.1 ABC transporter ATP-binding protein -
  DK43_RS07510 (DK43_07700) - 1563993..1564751 (-) 759 WP_003028303.1 TraX family protein -
  DK43_RS07515 (DK43_07705) - 1564874..1565854 (-) 981 WP_003028304.1 sensor histidine kinase -
  DK43_RS07520 (DK43_07710) braR 1565838..1566524 (-) 687 WP_022525182.1 response regulator transcription factor Regulator
  DK43_RS07525 (DK43_07715) - 1566618..1567799 (+) 1182 WP_003028307.1 DUF2974 domain-containing protein -
  DK43_RS07530 (DK43_07720) metG 1568278..1570275 (-) 1998 WP_003028308.1 methionine--tRNA ligase -
  DK43_RS07535 (DK43_07725) - 1570517..1570777 (+) 261 WP_003028309.1 SemiSWEET family transporter -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 26329.60 Da        Isoelectric Point: 5.1650

>NTDB_id=106153 DK43_RS07520 WP_022525182.1 1565838..1566524(-) (braR) [Streptococcus anginosus strain SA1]
MHKILLVEDDAVIRQQVKKMLEQWGFEVVAVEDFMQVLTIFAKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RYQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMVYEGEVITLTKNEFQIL
RVLFEHSGSIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLTNGSSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=106153 DK43_RS07520 WP_022525182.1 1565838..1566524(-) (braR) [Streptococcus anginosus strain SA1]
ATGCACAAGATATTATTAGTAGAAGACGATGCCGTCATTCGCCAACAAGTCAAAAAAATGCTGGAGCAATGGGGATTTGA
AGTGGTTGCAGTAGAGGATTTCATGCAGGTTTTGACGATTTTTGCCAAGGAAGAACCACATCTAGTGCTAATGGATATTG
GTCTCCCACTTTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCCATTATGTTTTTGTCATCA
AGATACCAAGCAATGGATATCGTCATGGCTATCAATATGGGGGGAGATGACTTTGTCACCAAGCCTTTTGACAACAATGT
TCTTCTTGCTAAAGTGCAAGGATTGTTGCGGCGGTCTTATGAGTTTGGAACGGATCAAAGCTTACTGGAATATCATGGAG
TTATTCTCAATCTCAAGTCCATGGATATGGTTTATGAAGGTGAAGTCATTACCTTGACCAAAAATGAATTTCAGATTTTG
CGCGTGCTGTTTGAGCATTCTGGCAGTATTGTCGCGCGTGATGACCTGATGAAAGAGCTCTGGAATAGTGATTTTTTCAT
TGATGACAATACCTTGTCGGTCAATGTGGCACGGTTGCGGAAAAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGCTACAGATTAACCAATGGATCATCAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0ABD7NE66

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.091

96.491

0.474


Multiple sequence alignment