Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF8JM_RS14640 Genome accession   NZ_CP171482
Coordinates   3046913..3047509 (+) Length   198 a.a.
NCBI ID   WP_004893148.1    Uniprot ID   A0A483M0T8
Organism   Klebsiella pneumoniae strain KP44_UID2108280040     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3041913..3052509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8JM_RS14620 - 3042105..3043862 (-) 1758 WP_004147851.1 Lon protease family protein -
  ACF8JM_RS14625 matP 3044048..3044500 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACF8JM_RS14630 ompA 3044632..3045702 (-) 1071 WP_002898408.1 porin OmpA -
  ACF8JM_RS14635 sulA 3046055..3046564 (-) 510 WP_004893150.1 SOS-induced cell division inhibitor SulA -
  ACF8JM_RS14640 sxy/tfoX 3046913..3047509 (+) 597 WP_004893148.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF8JM_RS14645 yccS 3047523..3049658 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACF8JM_RS14650 - 3049676..3050122 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACF8JM_RS14655 helD 3050247..3052301 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22562.12 Da        Isoelectric Point: 10.1298

>NTDB_id=1061468 ACF8JM_RS14640 WP_004893148.1 3046913..3047509(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP44_UID2108280040]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIGGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1061468 ACF8JM_RS14640 WP_004893148.1 3046913..3047509(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP44_UID2108280040]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCAGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGGCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(16-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A483M0T8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment