Detailed information NTG1061123

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACGTGP_RS01360
• Genome accession: NZ_CP171398
• Coordinates: 296895..297596 (-)
• Length: 233 a.a.
• NCBI ID: WP_272264565.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain T24
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 291895..302596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGTGP_RS01330 (ACGTGP_01330)	-	292202..292645 (-)	444	WP_031960450.1	SRPBCC family protein	-
ACGTGP_RS01335 (ACGTGP_01335)	tadA	292715..293218 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACGTGP_RS01340 (ACGTGP_01340)	-	293225..294349 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACGTGP_RS01345 (ACGTGP_01345)	ung	294346..295059 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACGTGP_RS01350 (ACGTGP_01350)	-	295110..295706 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACGTGP_RS01355 (ACGTGP_01355)	gspK	295936..296895 (-)	960	WP_272264566.1	type II secretion system minor pseudopilin GspK	-
ACGTGP_RS01360 (ACGTGP_01360)	xcpW	296895..297596 (-)	702	WP_272264565.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACGTGP_RS01365 (ACGTGP_01365)	xcpV	297596..297976 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACGTGP_RS01370 (ACGTGP_01370)	-	297966..298520 (-)	555	WP_000841373.1	type II secretion system protein	-
ACGTGP_RS01375 (ACGTGP_01375)	-	298530..299138 (-)	609	WP_272264613.1	TetR/AcrR family transcriptional regulator	-
ACGTGP_RS01380 (ACGTGP_01380)	-	299176..299949 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACGTGP_RS01385 (ACGTGP_01385)	-	299967..300308 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
ACGTGP_RS01390 (ACGTGP_01390)	-	300320..301300 (-)	981	WP_001075420.1	DNA polymerase III subunit delta'	-
ACGTGP_RS01395 (ACGTGP_01395)	kdsB	301312..302073 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26595.55 Da
• Isoelectric Point: 9.5501

>NTDB_id=1061123 ACGTGP_RS01360 WP_272264565.1 296895..297596(-) (xcpW) [Acinetobacter baumannii strain T24]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIIVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1061123 ACGTGP_RS01360 WP_272264565.1 296895..297596(-) (xcpW) [Acinetobacter baumannii strain T24]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATAGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987