Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACF0HW_RS12695 Genome accession   NZ_CP171208
Coordinates   2605839..2606030 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus amyloliquefaciens strain HN11     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2600839..2611030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF0HW_RS12670 - 2601197..2602183 (-) 987 WP_012117279.1 ABC transporter ATP-binding protein -
  ACF0HW_RS12675 - 2602357..2603142 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  ACF0HW_RS12680 fabF 2603226..2604464 (-) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  ACF0HW_RS12685 - 2604487..2605425 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ACF0HW_RS12690 - 2605592..2605810 (+) 219 WP_007409123.1 hypothetical protein -
  ACF0HW_RS12695 comZ 2605839..2606030 (-) 192 WP_003155061.1 ComZ family protein Regulator
  ACF0HW_RS12700 med 2606043..2606996 (-) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  ACF0HW_RS12705 - 2607086..2607652 (-) 567 WP_007409126.1 hypothetical protein -
  ACF0HW_RS12710 - 2607735..2608469 (-) 735 WP_012117276.1 hypothetical protein -
  ACF0HW_RS12715 - 2608730..2608915 (+) 186 WP_007409129.1 YjzD family protein -
  ACF0HW_RS12720 - 2608952..2609131 (-) 180 WP_003155070.1 YjzC family protein -
  ACF0HW_RS12725 argF 2609207..2610178 (-) 972 WP_012117275.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1060496 ACF0HW_RS12695 WP_003155061.1 2605839..2606030(-) (comZ) [Bacillus amyloliquefaciens strain HN11]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1060496 ACF0HW_RS12695 WP_003155061.1 2605839..2606030(-) (comZ) [Bacillus amyloliquefaciens strain HN11]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment