Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACF0HW_RS11395 Genome accession   NZ_CP171208
Coordinates   2368997..2369461 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus amyloliquefaciens strain HN11     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2363997..2374461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF0HW_RS11370 - 2364551..2365000 (-) 450 Protein_2239 hypothetical protein -
  ACF0HW_RS11375 fadH 2365165..2365929 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACF0HW_RS11380 - 2366074..2366937 (+) 864 WP_023356871.1 metallophosphoesterase -
  ACF0HW_RS11385 - 2367012..2367506 (+) 495 WP_088462390.1 L,D-transpeptidase family protein -
  ACF0HW_RS11390 - 2367582..2368874 (+) 1293 WP_012117436.1 MFS transporter -
  ACF0HW_RS11395 kre 2368997..2369461 (+) 465 WP_003154622.1 YkyB family protein Regulator
  ACF0HW_RS11400 cheV 2369505..2370416 (-) 912 WP_012117435.1 chemotaxis protein CheV -
  ACF0HW_RS11405 - 2370605..2370766 (+) 162 WP_007409608.1 hypothetical protein -
  ACF0HW_RS11410 - 2370967..2372180 (+) 1214 Protein_2247 aminotransferase A -
  ACF0HW_RS11415 - 2372161..2373981 (-) 1821 WP_023356869.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1060489 ACF0HW_RS11395 WP_003154622.1 2368997..2369461(+) (kre) [Bacillus amyloliquefaciens strain HN11]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1060489 ACF0HW_RS11395 WP_003154622.1 2368997..2369461(+) (kre) [Bacillus amyloliquefaciens strain HN11]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment