Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACFN7Z_RS12160 Genome accession   NZ_CP171157
Coordinates   2471736..2476217 (-) Length   1493 a.a.
NCBI ID   WP_094148349.1    Uniprot ID   -
Organism   Acinetobacter sp. P1332     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2466736..2481217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFN7Z_RS12130 (ACFN7Z_12130) elsL 2467783..2468286 (-) 504 WP_058952128.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ACFN7Z_RS12135 (ACFN7Z_12135) - 2468286..2468678 (-) 393 WP_058952129.1 YbaN family protein -
  ACFN7Z_RS12140 (ACFN7Z_12140) - 2468776..2469654 (+) 879 WP_058952130.1 DUF1853 family protein -
  ACFN7Z_RS12145 (ACFN7Z_12145) - 2469812..2469958 (+) 147 WP_058952131.1 entericidin A/B family lipoprotein -
  ACFN7Z_RS12150 (ACFN7Z_12150) dapE 2470077..2471210 (+) 1134 WP_058952132.1 succinyl-diaminopimelate desuccinylase -
  ACFN7Z_RS12155 (ACFN7Z_12155) - 2471276..2471731 (-) 456 WP_058952133.1 hypothetical protein -
  ACFN7Z_RS12160 (ACFN7Z_12160) chpA 2471736..2476217 (-) 4482 WP_094148349.1 Hpt domain-containing protein Regulator
  ACFN7Z_RS12165 (ACFN7Z_12165) - 2476384..2478456 (-) 2073 WP_058952135.1 methyl-accepting chemotaxis protein -
  ACFN7Z_RS12170 (ACFN7Z_12170) - 2478507..2479043 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  ACFN7Z_RS12175 (ACFN7Z_12175) - 2479049..2479417 (-) 369 WP_004694491.1 response regulator -
  ACFN7Z_RS12180 (ACFN7Z_12180) pilG 2479445..2479828 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  ACFN7Z_RS12185 (ACFN7Z_12185) - 2480109..2480747 (+) 639 WP_094148348.1 hypothetical protein -

Sequence


Protein


Download         Length: 1493 a.a.        Molecular weight: 166846.53 Da        Isoelectric Point: 4.4188

>NTDB_id=1060374 ACFN7Z_RS12160 WP_094148349.1 2471736..2476217(-) (chpA) [Acinetobacter sp. P1332]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPTFKEMQKIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTGLELSDIEVAESEPQVADVSEQDDQVHDVLEETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVADELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIEPVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATIKVLHNIQSLVEGTTLT
ASASEPLVEAFVKAIEEAQPLVQESLSNVDRTIEVETAAAVESATAIEASSIVENTDVTVVEQLDTPSLVQEEAASLLSI
VEETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYD
PLLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHL
DGGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYAD
FDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQT
ASTLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDAEQRSAAKKSVTGQIELNISRQGTDVIVSFKDDGK
GIDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGFGTTFI
IRVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDHYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGH
SLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRVTHAADH
RDFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHE
IHQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4482 bp        

>NTDB_id=1060374 ACFN7Z_RS12160 WP_094148349.1 2471736..2476217(-) (chpA) [Acinetobacter sp. P1332]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATCTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACCTTGTTGAGCATACGCCGTCACTTCCATACCTTAAAAGGCTCTGGTCGTATGGTGGGAGCAAAGTCAGCA
GGTGAAACAGCATGGGCGGTTGAAGATACCTTAAACCGTGTGATTTCAGGGGCTGTACCGCTTACGGCAACGGTTCAAAA
ATTTGCTAAAACAGTATTTAAACTGTATCAATTTAAACTGTACCCGACTTTTAAAGAGATGCAGAAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACGGGATTAGAGCTGAGCGATATCGAAGTGGCTGAATCTGAGCCACAAGT
TGCAGACGTTTCTGAGCAGGATGATCAAGTGCATGATGTCCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCAGTTCTTAAATGCAGATGAAACCAAAGTACAAGATTACAATGGTTTAATCCGGGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTTGAAAATCTATTTAA
AACTTTGGTTCAAGAAGAGATCGTTTCTACCTCGAAGGAAATCTCTTTACTCACCCAATATGCTGAATTTGTACGTGACT
ATTTACACGTGCTTGGGCGTGGTACGAACGAACAGCTTGACGTGATTTACGCCACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATTGAAGACGTAGCTGATGAGCTAAACCCACAAGGTATGGTTTCGAAGCTGATCGAGTTAAATATTGATCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTAGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTATATGCGGGTTAT
CAAGCCTTACTGGAAAAGCCAGAATTACTCAATGTAGACTATGCATATGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGTGTTATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAATTGAACCTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGCCTTGATCTTGCGCAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACGGCCAA
TACCGATTTTGATGATGATTTGCTCGATATCTTCTTGGAAGAAGCCGAAGAATTATTGATGGGGATGGATCAGGATCTTA
ATACTTGGTCTAAAAATGGCAATGATACAGCAGCGCTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATCATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACGG
AGAAGGTTGATTACCCAGCAACAGCGACCATTAAGGTATTGCATAACATTCAGAGCTTGGTTGAGGGTACGACTCTTACC
GCTTCAGCATCTGAGCCTTTGGTTGAGGCGTTTGTTAAAGCAATTGAAGAGGCTCAGCCTCTAGTTCAAGAATCTTTATC
TAATGTAGATAGAACGATTGAAGTTGAAACAGCTGCTGCTGTTGAGTCAGCAACTGCAATTGAAGCGTCAAGTATAGTTG
AAAACACGGACGTTACTGTCGTTGAACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGCCAGTCTGTTATCAATT
GTTGAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACG
TAGTGACCGTAGTGTGTTACTACAATTGCAACGTGCCGCGCACAGTTTAAAAGGCGGCGCACGTATGGCGGAGAATGAAC
CCGTTGGTGCGATTGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGAC
CCATTATTGCAAACCGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTTAGTAATTATGATGGTTTGAAAAA
CAGCTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCGACGCGTGTAACTCAAATTGATTTACTTAATGCGG
TACCAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTG
GATGGTGGTAATGAAATGATTCGTATCTCAGCTGATTTGGTTGAGAAAATGATCGACCTGTCCGGTGAAAATGCGATTAA
CCGTTCACGTATTGAGATGGACTTAGGTCAGCTCGGCAATACGTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCGG
ATCAGTTGCGTCGAATGGAAGGTGAGCTTGAGAGTCAAATTATTGCGAAGCACGGTTCTGAAAACTCGCGCTACGCAGAC
TTTGACCCCTTGGAAATGGACCAATATTCATCGCTGAATCAATTGTCTAAATCCTTAGCCGAATCAGCTTCGGATTTGGT
CGACTTCAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTATTACAACAATCCCGTATTCAAGCAGAGA
TTCAAGAAAGCTTAATGCGGACACGTTTGGTACCGTTCTCACGTATGCTGCCTCGTTTGCAACGTATTGTACGTCAGACC
GCATCAACTTTGAACCGTCCAACGGAATTGGTCGTCCATAACACCGAAGGTGAGTTGGACCGTACGATTCTTGAACGTTT
GGTTACGCCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATGCGGAACAACGTAGTGCTGCGAAAA
AATCAGTGACAGGCCAAATTGAACTAAACATTAGCCGTCAAGGTACAGACGTTATCGTCAGCTTTAAAGATGATGGTAAA
GGTATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAACTTAGGTTTAATTAAAGCCGATCAAGTGTTGGATAAACAGGA
AATCTTACAGTTTATTTTCCATCCGGGTTTTAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTTGGTCTTG
ATGTGGTACAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGATTCGGTACGACCTTCATT
ATTCGCGTACCGACTACGGTAGCGGTGAGTGATGCGTTGATGGTGAAAGCCGGTGATCAACAATATGCGATTCCATTGGC
GCAGATTGATCGTATTGTGCGTATTGCTCCAACAGCACTGGATCACTATTTCCACAGCAAAGATGACCAATTTAAAATTG
ATGGTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCGCGTTTGAGTAATATTGGACAT
TCATTGCCGGTGTTATTGATTAAAGGCAATAGTGGACAAACCATTGCATTGTTGGTTGATCAGCTGATTGGTTCACGTGC
GCAAATTGTAGTGAAGCCAGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCGGGTGCAACGATCTTGGGTGATGGCC
ATGTGTGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTAACGCATGCCGCCGATCAT
CGTGACTTTGGTCGTCATCAGGATACGCGTCGTTTAGTGATGATTGTGGATGACTCGGTTACGGTACGTAAGGTCACATC
GCGCTTATTAGAGCGTCAAGGCTTTGATATTGTGACTGCAAAAGACGGTGTCGATGCGATGGAGCAGCTGGAGAGCGTTA
AGCCAGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTTGAAGTAACGAACTTGGTTCGTCACCACGAA
ATTCACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGCGT
GACGCACTACATGGGCAAACCATTCCAAGAGGCAGAGTTACTTGCCAACATTCAGCAGTTATTGGCTGAAAAGCAGGGGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.634

100

0.615


Multiple sequence alignment