Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACFN7Z_RS02250 Genome accession   NZ_CP171157
Coordinates   468991..469848 (+) Length   285 a.a.
NCBI ID   WP_395442675.1    Uniprot ID   -
Organism   Acinetobacter sp. P1332     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 463991..474848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFN7Z_RS02225 (ACFN7Z_02225) - 464280..464953 (-) 674 Protein_430 diguanylate cyclase -
  ACFN7Z_RS02230 (ACFN7Z_02230) - 465033..465965 (+) 933 WP_395442564.1 IS5 family transposase -
  ACFN7Z_RS02235 (ACFN7Z_02235) - 466521..467096 (-) 576 WP_004691243.1 xanthine phosphoribosyltransferase -
  ACFN7Z_RS02240 (ACFN7Z_02240) - 467186..467896 (-) 711 WP_395442565.1 DUF3108 domain-containing protein -
  ACFN7Z_RS02245 (ACFN7Z_02245) - 468052..468729 (-) 678 WP_395442566.1 hypothetical protein -
  ACFN7Z_RS02250 (ACFN7Z_02250) tonB2 468991..469848 (+) 858 WP_395442675.1 energy transducer TonB Machinery gene
  ACFN7Z_RS02255 (ACFN7Z_02255) - 469894..470304 (-) 411 WP_125274118.1 hypothetical protein -
  ACFN7Z_RS02260 (ACFN7Z_02260) ybeY 470406..470885 (-) 480 WP_395442567.1 rRNA maturation RNase YbeY -
  ACFN7Z_RS02265 (ACFN7Z_02265) - 470943..472019 (-) 1077 WP_004977846.1 PhoH family protein -
  ACFN7Z_RS02270 (ACFN7Z_02270) miaB 472058..473515 (-) 1458 WP_078426188.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 285 a.a.        Molecular weight: 32585.06 Da        Isoelectric Point: 6.3661

>NTDB_id=1060363 ACFN7Z_RS02250 WP_395442675.1 468991..469848(+) (tonB2) [Acinetobacter sp. P1332]
MPLAHDWWKDPIFTATVVLAVFLHLVILTLQFAMPQENDAAVKEIAVTLRPSDQKIENADFLAQADQQGSGTFRESHRMS
SDMPAPMLEQSTGEQQRETLEQIQQKRELNFEEKLLMTTLSWQKQAEDNQRKKAMEEMNSQFQAKAAMVASLEAQYLQRQ
QNFSRQQKIKTVDGIQAKQDISAAYLEKFRQKVEFYGNRYYPEAAKQQRLAGEVRLMVILNGSGGIRAIRLIDSSGHEML
DEAAKASVRKAAPFGGFDAKMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 858 bp        

>NTDB_id=1060363 ACFN7Z_RS02250 WP_395442675.1 468991..469848(+) (tonB2) [Acinetobacter sp. P1332]
ATGCCTTTGGCTCATGATTGGTGGAAAGACCCAATTTTTACAGCGACCGTTGTACTGGCGGTATTTTTGCATCTCGTGAT
TTTGACTTTGCAATTTGCGATGCCTCAAGAAAATGATGCGGCAGTGAAAGAAATTGCTGTCACTTTGCGTCCTTCTGATC
AAAAAATTGAAAACGCAGATTTTTTAGCACAAGCCGATCAACAAGGTTCAGGGACTTTTCGTGAGTCACATCGCATGTCG
AGTGACATGCCCGCACCGATGCTTGAGCAAAGTACAGGCGAACAGCAGCGTGAAACTTTAGAACAGATCCAACAAAAACG
TGAGCTGAATTTTGAAGAAAAACTGTTGATGACGACTTTAAGTTGGCAAAAACAAGCTGAGGATAACCAGCGCAAAAAAG
CCATGGAAGAAATGAACAGCCAGTTTCAAGCCAAAGCAGCAATGGTGGCCAGCCTTGAAGCGCAATATTTACAACGCCAA
CAAAACTTTAGCCGTCAGCAAAAAATTAAAACAGTCGATGGTATTCAAGCCAAGCAAGATATTTCGGCCGCCTATCTTGA
AAAGTTCCGTCAGAAAGTGGAATTTTATGGCAACCGTTACTATCCAGAAGCAGCTAAACAGCAGCGGCTGGCGGGTGAAG
TGCGTTTAATGGTGATTCTAAATGGATCAGGAGGCATCCGCGCCATTCGCCTGATTGATAGTTCAGGTCATGAGATGCTC
GATGAGGCTGCAAAAGCCTCAGTGCGTAAAGCCGCACCATTCGGTGGGTTTGATGCCAAAATGAAGGATATTTCTGAGTT
ACGCATTGTGCGTACATGGCGTTTTGACCCAGCAGAGGCGGAGTTTGAAGTGCACTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(198-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

73.929

98.246

0.726

Multiple sequence alignment