Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACF3OI_RS06675 Genome accession   NZ_CP170999
Coordinates   1284397..1286193 (-) Length   598 a.a.
NCBI ID   WP_102164309.1    Uniprot ID   A0A2N6SSA7
Organism   Finegoldia magna strain WGS1513     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1279397..1291193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF3OI_RS06655 (ACF3OI_06655) - 1280100..1280225 (-) 126 WP_017650677.1 erythromycin resistance leader peptide -
  ACF3OI_RS06660 (ACF3OI_06660) - 1280630..1281109 (-) 480 WP_000700631.1 Csac_0668 family 2Fe-2S cluster-binding (seleno)protein -
  ACF3OI_RS06665 (ACF3OI_06665) - 1281508..1282457 (-) 950 Protein_1285 IS3 family transposase -
  ACF3OI_RS06670 (ACF3OI_06670) rlmD 1282815..1284305 (-) 1491 WP_392434353.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ACF3OI_RS06675 (ACF3OI_06675) rcrQ 1284397..1286193 (-) 1797 WP_102164309.1 ABC transporter ATP-binding protein Regulator
  ACF3OI_RS06680 (ACF3OI_06680) rcrP 1286186..1287946 (-) 1761 WP_392434357.1 ABC transporter ATP-binding protein Regulator
  ACF3OI_RS06685 (ACF3OI_06685) - 1287921..1288397 (-) 477 WP_392434360.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACF3OI_RS06690 (ACF3OI_06690) thiC 1288554..1289855 (-) 1302 WP_306479088.1 phosphomethylpyrimidine synthase ThiC -
  ACF3OI_RS06695 (ACF3OI_06695) - 1290036..1290950 (-) 915 WP_306479089.1 cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein -

Sequence

Protein


Download         Length: 598 a.a.        Molecular weight: 67151.26 Da        Isoelectric Point: 6.6652

>NTDB_id=1059996 ACF3OI_RS06675 WP_102164309.1 1284397..1286193(-) (rcrQ) [Finegoldia magna strain WGS1513]
MPRQVVNEKPKKFKKTLKEMVGYLKPYFPLILIAVVASVIATILQIIGPDKLKLITDEITKGLPKMVKGKPVLASINMDN
VKSITIMLVIFYGSSLLLNLLQRFIMADVTQKISKSFREKIAVKINKLPFSYFDNTTYGDILSRVTNDVDTISQSLNQSI
GTLLTSIVMLLGTLVMMIYNSGILTITTILSSLVGFVFITIIMKKSQKYFKAQQQNLGDINGQIEEVYTGHNVIKAYNAG
ERVIDEFEQMNTQLYTSAWKSQFLSGLMMPIMQFAGNFSYVMVCIVGGALAINGKISFGVIVAFMIYVRLFTNPLSDIAQ
SFNTLQRAAAAGERVFEFLNEKELEEENVTEKLDRAKGEVEFKDVRFGYNPDKIIIKDFSVKVNPGEKIAIVGPTGAGKT
TIVNLLMRFYEINDGQILVDGIDTKNLSRENLRDQFCMVLQDSWVFEASVRENITFGLEDITDEELIDVCKRVNLDHFIR
TLPNGYDTILNDKQSLSQGQLQLLTIARAMVSHAPMLILDEATSSVDTRTEIIVQDAMDELAKGRTSFVIAHRLSTIKNA
DLILVMKDGDIVEKGKHDELLARDGFYAQLYNAQFERK

Nucleotide


Download         Length: 1797 bp        

>NTDB_id=1059996 ACF3OI_RS06675 WP_102164309.1 1284397..1286193(-) (rcrQ) [Finegoldia magna strain WGS1513]
ATGCCTAGACAAGTTGTAAATGAAAAACCAAAAAAATTCAAGAAAACATTAAAAGAAATGGTAGGGTATTTGAAACCTTA
TTTCCCATTGATACTGATAGCGGTTGTAGCAAGCGTGATAGCAACAATCTTGCAAATAATTGGGCCAGATAAGCTCAAAC
TAATCACAGATGAAATCACTAAAGGACTTCCTAAAATGGTAAAAGGAAAACCTGTTTTGGCTTCAATCAATATGGATAAT
GTCAAATCTATTACAATAATGCTTGTAATATTTTATGGATCGTCTTTATTGCTGAATTTGTTGCAAAGATTCATCATGGC
AGATGTTACGCAAAAAATCTCCAAATCATTCAGAGAAAAAATTGCAGTCAAAATCAACAAATTGCCATTTAGCTATTTTG
ATAACACAACTTACGGAGACATTCTAAGTAGAGTTACAAATGATGTCGACACCATCAGCCAAAGCTTGAACCAATCAATA
GGAACGTTGTTGACAAGTATTGTAATGCTTTTAGGCACACTTGTAATGATGATCTACAATTCAGGGATTTTAACGATAAC
TACGATATTGTCATCACTTGTAGGGTTTGTGTTCATCACAATAATAATGAAAAAATCACAAAAATATTTCAAAGCACAAC
AACAAAACTTAGGTGATATCAACGGACAAATCGAAGAAGTGTACACTGGTCACAACGTAATCAAAGCATACAACGCTGGT
GAACGTGTGATAGATGAATTTGAACAAATGAATACACAACTTTACACAAGCGCATGGAAATCGCAATTCTTGTCAGGACT
AATGATGCCTATTATGCAATTTGCAGGAAACTTTTCGTACGTTATGGTCTGCATAGTCGGAGGAGCATTGGCAATCAACG
GCAAAATATCATTCGGTGTAATAGTAGCGTTTATGATTTATGTGAGATTGTTCACCAATCCATTATCAGATATAGCTCAA
AGTTTCAACACATTACAAAGAGCTGCAGCGGCAGGGGAGAGAGTGTTCGAATTTTTGAACGAAAAAGAATTAGAAGAAGA
AAACGTAACTGAAAAACTCGACAGAGCAAAAGGCGAAGTCGAATTCAAAGACGTTAGATTTGGATATAATCCAGACAAAA
TCATCATCAAAGATTTCAGCGTAAAAGTAAATCCAGGAGAAAAAATAGCCATCGTTGGGCCAACTGGAGCCGGAAAGACT
ACGATTGTAAATCTATTAATGAGATTTTACGAAATAAACGATGGACAAATATTGGTAGACGGAATTGATACGAAAAACTT
ATCCAGAGAGAATTTGAGAGACCAATTCTGTATGGTACTTCAAGATTCGTGGGTATTCGAAGCAAGTGTCAGAGAAAACA
TAACATTCGGATTAGAAGATATAACTGACGAAGAATTGATAGACGTGTGCAAACGCGTAAACTTAGATCACTTTATCAGA
ACACTTCCAAATGGATATGACACTATTTTAAACGACAAACAATCATTGTCTCAAGGACAACTTCAACTACTCACAATCGC
ACGTGCAATGGTAAGTCACGCACCAATGTTGATACTAGATGAAGCCACAAGCTCCGTGGATACGAGAACTGAAATAATCG
TTCAAGATGCAATGGACGAACTTGCAAAAGGAAGAACATCATTTGTAATCGCGCACAGATTATCCACAATCAAAAACGCG
GATTTGATACTTGTAATGAAAGACGGAGACATCGTAGAAAAAGGAAAACACGACGAATTATTGGCACGTGACGGATTCTA
CGCACAATTATACAACGCGCAATTTGAAAGAAAATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(377-524)

ABC transporter transmembrane region (ABC_membrane)

(31-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N6SSA7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

54.872

97.826

0.537

Multiple sequence alignment