Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACFKHK_RS10765 Genome accession   NZ_CP170760
Coordinates   2031478..2032236 (+) Length   252 a.a.
NCBI ID   WP_171989297.1    Uniprot ID   -
Organism   Streptococcus parasuis strain FZ2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2026478..2037236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFKHK_RS10750 - 2028872..2029555 (-) 684 WP_171989295.1 YoaK family protein -
  ACFKHK_RS10755 rlmH 2029562..2030041 (-) 480 WP_130554909.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACFKHK_RS10760 htrA 2030234..2031415 (+) 1182 WP_171989296.1 S1C family serine protease Regulator
  ACFKHK_RS10765 spo0J 2031478..2032236 (+) 759 WP_171989297.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28969.39 Da        Isoelectric Point: 9.4765

>NTDB_id=1059296 ACFKHK_RS10765 WP_171989297.1 2031478..2032236(+) (spo0J) [Streptococcus parasuis strain FZ2]
MEELHYLKIKDIQANPYQPRLHFDEEKLLELAQSIKENGVIQPIIVRRSPLIGFELLAGERRLRASQLAGLTEIPAVIKH
LSDDDLLYQAIIENLQRSDLNPIEEAHSYEKLIKKGLTHDEIAQIMGKSRPYITNLLRLLHLSESTRQAVETGKITQGHA
RQLVALSERQQAEWVQKIQEKDISVRQLETILSSKKKKTIRKSNQFVAEEEEKLAKLLGTKVTIQQKKNGSGQLTIQFQN
IEEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1059296 ACFKHK_RS10765 WP_171989297.1 2031478..2032236(+) (spo0J) [Streptococcus parasuis strain FZ2]
ATGGAAGAACTACACTATCTCAAAATAAAAGACATTCAGGCCAATCCCTATCAACCAAGATTGCATTTTGATGAAGAAAA
ATTATTGGAATTAGCTCAATCTATCAAAGAAAATGGCGTCATTCAACCTATTATTGTTCGCAGATCACCGCTGATTGGTT
TTGAGTTACTTGCTGGTGAAAGACGATTAAGAGCTAGTCAACTAGCGGGATTAACAGAGATTCCAGCAGTCATCAAGCAT
CTATCTGATGATGATTTACTCTACCAAGCTATCATAGAAAACTTACAACGCTCTGACCTCAATCCTATTGAAGAGGCTCA
TTCCTACGAAAAGTTGATAAAAAAAGGCTTAACACATGATGAGATTGCCCAAATCATGGGAAAATCACGACCATATATCA
CTAATCTTCTTCGTTTACTCCATTTATCCGAATCTACGAGGCAAGCAGTAGAAACAGGAAAAATCACACAAGGGCATGCT
AGACAGCTAGTAGCACTATCAGAGAGACAACAAGCAGAATGGGTTCAAAAAATCCAAGAAAAGGATATCAGCGTACGACA
GTTAGAAACAATACTATCCTCTAAAAAGAAAAAAACAATTAGAAAATCCAACCAATTTGTTGCAGAAGAAGAAGAGAAAT
TAGCAAAACTACTTGGAACCAAGGTAACAATCCAACAAAAGAAAAATGGATCGGGACAACTGACTATTCAATTTCAAAAC
ATCGAAGAATTTGAAAGAATTATCAACAGTCTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.941

100

0.552

Multiple sequence alignment