Detailed information NTG1059274

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: ACFKHK_RS08315
• Genome accession: NZ_CP170760
• Coordinates: 1567274..1569520 (+)
• Length: 748 a.a.
• NCBI ID: WP_392461798.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain FZ2
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1562274..1574520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKHK_RS08290	-	1563211..1564119 (+)	909	WP_171989204.1	neutral zinc metallopeptidase	-
ACFKHK_RS08295	-	1564200..1565051 (-)	852	WP_130554559.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	-
ACFKHK_RS08300	-	1565180..1565914 (-)	735	WP_174845581.1	amino acid ABC transporter ATP-binding protein	-
ACFKHK_RS08305	-	1565922..1566596 (-)	675	WP_171989206.1	amino acid ABC transporter permease	-
ACFKHK_RS08310	-	1566715..1566945 (-)	231	WP_024392448.1	DUF1797 family protein	-
ACFKHK_RS08315	clpE	1567274..1569520 (+)	2247	WP_392461798.1	AAA family ATPase	Regulator
ACFKHK_RS08320	-	1569667..1570134 (+)	468	WP_216806471.1	NUDIX hydrolase	-
ACFKHK_RS08325	-	1570181..1570489 (+)	309	WP_024396912.1	DUF1827 family protein	-
ACFKHK_RS08330	ileS	1570552..1573341 (-)	2790	WP_392462668.1	isoleucine--tRNA ligase	-
ACFKHK_RS08335	-	1573352..1573795 (-)	444	WP_171989210.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 83404.83 Da
• Isoelectric Point: 5.2214

>NTDB_id=1059274 ACFKHK_RS08315 WP_392461798.1 1567274..1569520(+) (clpE) [Streptococcus parasuis strain FZ2]
MLCTNCKINDATIHLYTNMNGKQQKVDLCHNCYQIMKTDPNNAILRGLGENLTNPNNMDPFSEFFNHLGGYPGNTPAGKN
RDQTPPTQAGGGNGGGRFNQPNVGQTQTDPQPNGLLEEFGINVTEIARRGDIDPVIGRDQEITRVIEILNRRTKNNPVLI
GEPGVGKTAVVEGLAQKIVDGDVPHKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRREVILFIDEIHEIVGA
GSAGDGNMDAGNILKPALARGEMQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQNKYQDYHHVKYS
PEAIEAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQRLIDAENRKEQATRDEDYEKAAYYRDQIAKY
KEMQKATISEEDIPLITEKEIEAIIEQKTNIPVGELKEKEQSQLIHLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGAPN
RPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLIL
LDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAMEGRTQSVLGQLGNFFTPEFM
NRFDGIIEFQPLTKENLLQIVSLMLEDVNRRLSTNGIRLHVTDKVKEKLVDLGYDPKMGARPLRRTIQDQIEDAITDFYL
ENPNEKDLRAVMTNKGTIQIKAQPPKEK

Nucleotide

• Length: 2247 bp

>NTDB_id=1059274 ACFKHK_RS08315 WP_392461798.1 1567274..1569520(+) (clpE) [Streptococcus parasuis strain FZ2]
ATGCTCTGTACAAACTGTAAAATAAATGATGCTACCATTCATCTCTATACAAATATGAATGGCAAACAACAGAAAGTTGA
CCTTTGCCATAATTGTTATCAAATTATGAAAACGGATCCAAATAATGCTATCTTACGTGGCTTAGGGGAGAACTTAACTA
ATCCAAACAATATGGATCCCTTTAGTGAATTTTTCAATCATTTAGGTGGTTACCCTGGTAATACCCCAGCTGGTAAGAAT
CGAGATCAAACACCTCCTACTCAAGCAGGCGGTGGCAACGGTGGTGGTCGATTCAATCAACCAAATGTGGGTCAAACCCA
AACAGACCCACAACCAAATGGATTGCTGGAAGAATTTGGGATTAATGTTACTGAGATTGCACGACGTGGAGATATTGACC
CCGTTATCGGACGCGATCAAGAAATCACTCGGGTGATTGAAATTTTGAACCGTCGCACCAAAAACAACCCCGTTCTTATC
GGTGAGCCCGGTGTTGGTAAAACTGCAGTCGTTGAAGGACTAGCACAAAAAATTGTAGACGGGGACGTTCCACATAAACT
TCAAAACAAAGAAGTCATTCGATTAGACGTTGTCAGCCTTGTTCAAGGAACAGGAATCCGAGGTCAATTTGAAGAACGCA
TGCAAAAACTCATGGAAGAAATTCGGAACCGACGTGAAGTTATTCTCTTCATTGATGAAATTCATGAGATTGTCGGAGCT
GGTTCTGCAGGAGATGGAAACATGGATGCCGGCAATATTCTAAAACCCGCCCTCGCTCGTGGTGAAATGCAACTGGTCGG
TGCTACTACTTTAAATGAATACCGCATTATTGAAAAAGATGCAGCTCTTGAACGTCGGATGCAACCTGTAAAAGTTGACG
AACCAAGTGTTGAAGAAACAATCACTATCTTAAAAGGTATTCAGAATAAATACCAAGACTACCACCATGTAAAATATTCC
CCTGAGGCAATTGAAGCTGCGGCCGTATTATCCAACCGCTATATTCAAGACCGATTCTTACCTGATAAAGCGATTGATTT
GCTAGACGAAGCTGGATCAAAAATGAACTTAACCTTGAACTTCGTAGATCCTAAAGAAATTGACCAACGGTTAATTGATG
CCGAAAATCGTAAAGAACAAGCAACTCGTGATGAAGATTACGAAAAAGCTGCCTATTATCGTGACCAAATTGCTAAATAT
AAAGAAATGCAAAAGGCAACGATTAGTGAGGAGGATATTCCTCTCATTACCGAAAAAGAAATCGAAGCCATCATTGAACA
AAAAACAAATATCCCCGTTGGCGAGCTGAAAGAAAAAGAACAGTCTCAATTGATACATTTGGCAAGTGATCTCAAAGCGC
ATGTCATTGGACAAGACGATGCTGTTGATAAAATTGCAAAAGCAATCCGTCGCAATCGTGTAGGACTTGGAGCACCAAAT
CGTCCAATTGGTTCCTTCTTATTCGTAGGACCTACTGGCGTCGGTAAAACAGAATTATCAAAACAATTAGCCATTGAGCT
CTTCGGTTCAGCGGACAGCATGATTCGATTTGATATGTCTGAATATATGGAAAAACACGCAGTTGCAAAACTAGTCGGTG
CCCCTCCTGGATATGTGGGGTATGAAGAAGCTGGCCAACTAACAGAAAAAGTCCGTCGCAATCCATACTCACTCATTCTC
CTTGATGAAGTTGAAAAGGCGCATCCAGATGTGATGCACATGTTCCTACAAGTTCTTGATGACGGTCGACTGACAGATGG
ACAAGGGCGAACAGTCAGCTTCAAAGATACCATTATCATTATGACTTCAAATGCTGGTACAGGTAAGGTTGAGGCCAGCG
TGGGATTTGGAGCCGCTATGGAAGGTCGTACACAATCTGTTCTTGGCCAACTCGGTAATTTCTTCACTCCCGAATTCATG
AACCGCTTCGATGGAATTATTGAATTCCAACCACTTACAAAAGAAAATCTGCTCCAAATTGTCAGTCTCATGCTGGAAGA
CGTCAACCGTCGCTTATCTACAAACGGTATTCGACTACATGTGACCGATAAAGTAAAGGAAAAATTAGTTGATCTTGGTT
ACGATCCTAAAATGGGTGCACGTCCCCTTCGCAGGACCATTCAAGACCAAATTGAAGATGCCATTACCGATTTCTATTTA
GAGAATCCTAATGAGAAAGATTTACGAGCTGTCATGACCAATAAAGGCACCATCCAAATCAAAGCTCAACCGCCAAAAGA
AAAATAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (158-277)

• AAA domain (Cdc48 subfamily) (AAA_2) (481-644)

• AAA lid domain (AAA_lid_9) (296-394)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (652-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus pneumoniae Rx1	82.713	100	0.832
clpE	Streptococcus pneumoniae D39	82.713	100	0.832
clpE	Streptococcus pneumoniae R6	82.713	100	0.832
clpE	Streptococcus pneumoniae TIGR4	82.713	100	0.832
clpE	Streptococcus mutans UA159	83.087	99.599	0.828
clpC	Lactococcus lactis subsp. cremoris KW2	76.438	97.594	0.746
clpC	Bacillus subtilis subsp. subtilis str. 168	52.167	83.289	0.434
clpC	Streptococcus mutans UA159	47.235	84.626	0.4
clpC	Streptococcus pneumoniae TIGR4	47.52	83.556	0.397
clpC	Streptococcus pneumoniae Rx1	47.52	83.556	0.397
clpC	Streptococcus pneumoniae D39	47.52	83.556	0.397
clpC	Streptococcus thermophilus LMD-9	46.688	84.759	0.396
clpC	Streptococcus thermophilus LMG 18311	46.372	84.759	0.393
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.361	84.492	0.392