Detailed information NTG1059255

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: ACFKHK_RS03035
• Genome accession: NZ_CP170760
• Coordinates: 553240..554289 (+)
• Length: 349 a.a.
• NCBI ID: WP_277745576.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain FZ2
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 548240..559289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKHK_RS03000	-	549182..550063 (+)	882	WP_239604589.1	histidine kinase	-
ACFKHK_RS03005	-	550060..550659 (+)	600	WP_277745573.1	response regulator transcription factor	-
ACFKHK_RS03010	-	550777..550998 (+)	222	WP_024396172.1	YqgQ family protein	-
ACFKHK_RS03015	-	550995..551381 (+)	387	WP_277745574.1	rhodanese-like domain-containing protein	-
ACFKHK_RS03020	-	551414..552148 (+)	735	WP_277745575.1	hypothetical protein	-
ACFKHK_RS03025	rsmD	552236..552775 (+)	540	WP_171988895.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACFKHK_RS03030	coaD	552765..553253 (+)	489	WP_217374760.1	pantetheine-phosphate adenylyltransferase	-
ACFKHK_RS03035	sepM	553240..554289 (+)	1050	WP_277745576.1	SepM family pheromone-processing serine protease	Regulator
ACFKHK_RS03040	-	554573..555226 (+)	654	WP_277745577.1	YutD family protein	-
ACFKHK_RS03045	rlmN	555235..556347 (+)	1113	WP_171988891.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
ACFKHK_RS03050	-	556344..556856 (+)	513	WP_171988890.1	VanZ family protein	-
ACFKHK_RS03055	nadE	557295..558119 (-)	825	WP_277745578.1	ammonia-dependent NAD(+) synthetase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37893.67 Da
• Isoelectric Point: 4.1176

>NTDB_id=1059255 ACFKHK_RS03035 WP_277745576.1 553240..554289(+) (sepM) [Streptococcus parasuis strain FZ2]
MKKNKKWLLIVSIIMGTLLIWFSVFVRLPYYIESPGGASDIREVLTVNNEEDEEPGSYNFTYVSVLQATALQLLIAQFNP
YADIVSAEEMTGGADSEEYYRIARFYMETSQNMAKYQGLTLADKDVEMDFFGVYVLDLAEDSTFKNVLNIADTVVSINGQ
TFESSQGLIKYVSGLELDSDVTVGYVSDGEEKTADGKIIKLSNGKNGIGITLVDHTEVKSSVPIDFQTGGIGGPSAGMMF
TLAIYTQLTEPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAINAGASVFFVPNNPVDPEILKKNPTAKTNYEEAKEA
AEKANADIEIVPVTTVQEAIDYLKSTKSE

Nucleotide

• Length: 1050 bp

>NTDB_id=1059255 ACFKHK_RS03035 WP_277745576.1 553240..554289(+) (sepM) [Streptococcus parasuis strain FZ2]
ATGAAGAAAAATAAGAAATGGCTATTGATTGTTTCAATTATTATGGGGACGTTATTGATATGGTTTTCCGTTTTTGTACG
TCTACCATATTATATTGAGAGTCCTGGAGGGGCTTCGGATATTCGGGAAGTATTGACAGTCAACAATGAAGAAGATGAGG
AGCCAGGTTCTTATAATTTTACCTATGTATCGGTCTTGCAGGCAACAGCCTTACAGTTGCTGATTGCTCAGTTTAACCCC
TACGCAGATATTGTTTCTGCAGAAGAAATGACGGGTGGTGCAGACAGTGAAGAATACTATCGAATAGCTCGATTTTATAT
GGAAACCTCTCAAAACATGGCTAAATATCAAGGATTGACCTTGGCTGACAAGGATGTGGAGATGGATTTCTTTGGGGTAT
ATGTGTTGGATTTGGCAGAAGACTCTACGTTTAAAAATGTATTGAATATCGCTGATACGGTTGTTAGTATAAATGGTCAA
ACGTTTGAATCTTCTCAGGGACTAATTAAATATGTTTCAGGCTTAGAACTTGATAGTGATGTAACAGTTGGCTATGTTAG
TGATGGAGAAGAAAAGACTGCCGACGGAAAAATTATCAAATTATCAAATGGTAAAAACGGGATTGGTATCACGCTAGTAG
ACCATACTGAGGTAAAAAGTTCTGTCCCAATTGATTTCCAAACAGGAGGAATTGGTGGTCCAAGTGCTGGTATGATGTTT
ACATTAGCTATTTATACACAGCTGACTGAGCCAGACTTGCGTGATGGTCGTGTTATTGCAGGAACAGGAACGATTGAACA
AGATGGTTCCGTTGGAGACATCGGAGGAGCAGATAAAAAAGTATTATCTGCGATTAATGCTGGTGCAAGTGTTTTCTTTG
TTCCAAATAATCCAGTGGACCCAGAAATTTTGAAAAAGAATCCAACAGCTAAGACAAACTATGAAGAGGCAAAAGAAGCA
GCAGAAAAGGCCAATGCTGATATTGAAATCGTACCAGTTACGACTGTTCAAGAAGCCATTGATTATTTGAAGAGTACTAA
GAGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	60.694	99.14	0.602