Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFKHJ_RS09085 Genome accession   NZ_CP170759
Coordinates   1748661..1749395 (-) Length   244 a.a.
NCBI ID   WP_130555358.1    Uniprot ID   A0A4Q8L0H7
Organism   Streptococcus parasuis strain FZ1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1743661..1754395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFKHJ_RS09060 - 1744599..1745453 (-) 855 WP_174846640.1 helix-turn-helix domain-containing protein -
  ACFKHJ_RS09065 rpmB 1745753..1745941 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  ACFKHJ_RS09070 trmB 1746144..1746783 (-) 640 Protein_1756 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACFKHJ_RS09075 ccrZ 1746780..1747574 (-) 795 WP_105127234.1 cell cycle regulator CcrZ -
  ACFKHJ_RS09080 - 1747624..1748664 (-) 1041 WP_171989647.1 ABC transporter permease -
  ACFKHJ_RS09085 pptA 1748661..1749395 (-) 735 WP_130555358.1 ABC transporter ATP-binding protein Regulator
  ACFKHJ_RS09090 - 1749458..1749871 (+) 414 WP_171989648.1 HIT family protein -
  ACFKHJ_RS09095 - 1749873..1750178 (+) 306 WP_174846644.1 chemotaxis protein -
  ACFKHJ_RS09100 - 1750317..1751492 (-) 1176 WP_174846645.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACFKHJ_RS09105 - 1751489..1752016 (-) 528 WP_174846646.1 GNAT family N-acetyltransferase -
  ACFKHJ_RS09110 tsaE 1752009..1752449 (-) 441 WP_024404749.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACFKHJ_RS09115 - 1752648..1753904 (+) 1257 WP_392452205.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27051.38 Da        Isoelectric Point: 4.6053

>NTDB_id=1059225 ACFKHJ_RS09085 WP_130555358.1 1748661..1749395(-) (pptA) [Streptococcus parasuis strain FZ1]
MLEVKNITGGYINIPVVKDVSFTVESGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGEILIDGKSLVQDAENYRKKIGFIP
ETPSLYEELTLKEHLEVVALAYDLTWDQAWSRVQGLLTVFRLDEKLDWFPVHFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLVNLLEEEKAKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQHAFNMKGASLNEIYLALTQE
GVAR

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1059225 ACFKHJ_RS09085 WP_130555358.1 1748661..1749395(-) (pptA) [Streptococcus parasuis strain FZ1]
ATGTTAGAAGTAAAAAATATAACAGGAGGCTACATCAATATTCCCGTAGTGAAAGATGTATCTTTCACTGTTGAGAGCGG
TCAGTTAGTTGGCTTAATTGGATTGAATGGTGCAGGGAAATCAACGACGATAAAGGAAATTATTGGCCTTTTGACTCCTT
ATCAAGGAGAAATTTTAATTGATGGGAAAAGTCTTGTACAGGATGCAGAGAATTATCGGAAGAAAATTGGATTTATCCCT
GAAACACCTAGCTTGTATGAGGAATTGACGCTTAAGGAACATTTAGAGGTAGTAGCTTTAGCCTATGATTTGACTTGGGA
TCAAGCCTGGAGTCGAGTTCAGGGGTTGTTAACGGTTTTTCGGTTGGATGAAAAATTGGACTGGTTCCCTGTTCATTTTT
CTAAGGGAATGAAACAGAAAGTTATGATTATCTGTGCTTTCATGGTGGAACCGAGTTTGTTGATTGTTGATGAGCCGTTT
TTAGGGCTGGATCCTGTAGCGATTTCGGACTTAGTAAACCTATTAGAAGAGGAGAAAGCTAAAGGAACTTCAATTCTGAT
GTCTACTCATGTTCTTGATTCGGCCGAGAAAATGTGTGATTCTTTTGTTATCTTACATCAAGGTCAGGTTCGTGCAACAG
GGAATTTAGAGGAATTGCAACATGCCTTTAACATGAAAGGTGCAAGTCTCAACGAAATTTATCTGGCGTTGACACAAGAA
GGAGTGGCCAGATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

70.711

97.951

0.693
  pptA Streptococcus thermophilus LMD-9

69.456

97.951

0.68

Multiple sequence alignment