Detailed information NTG1059200

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: ACFKHJ_RS02965
• Genome accession: NZ_CP170759
• Coordinates: 555978..557027 (+)
• Length: 349 a.a.
• NCBI ID: WP_392452884.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain FZ1
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 550978..562027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKHJ_RS02930	-	551717..552811 (+)	1095	WP_392452877.1	sensor histidine kinase	-
ACFKHJ_RS02935	-	552808..553407 (+)	600	WP_392452878.1	response regulator	-
ACFKHJ_RS02940	-	553515..553736 (+)	222	WP_024396172.1	YqgQ family protein	-
ACFKHJ_RS02945	-	553733..554119 (+)	387	WP_130554731.1	rhodanese-like domain-containing protein	-
ACFKHJ_RS02950	-	554152..554886 (+)	735	WP_392452881.1	hypothetical protein	-
ACFKHJ_RS02955	rsmD	554974..555513 (+)	540	WP_171988895.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACFKHJ_RS02960	coaD	555503..555991 (+)	489	WP_217374760.1	pantetheine-phosphate adenylyltransferase	-
ACFKHJ_RS02965	sepM	555978..557027 (+)	1050	WP_392452884.1	SepM family pheromone-processing serine protease	Regulator
ACFKHJ_RS02970	-	557311..557964 (+)	654	WP_392452885.1	YutD family protein	-
ACFKHJ_RS02975	rlmN	557973..559085 (+)	1113	WP_392452886.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
ACFKHJ_RS02980	-	559082..559594 (+)	513	WP_174845850.1	VanZ family protein	-
ACFKHJ_RS02985	nadE	560033..560857 (-)	825	WP_171988889.1	ammonia-dependent NAD(+) synthetase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37920.74 Da
• Isoelectric Point: 4.1516

>NTDB_id=1059200 ACFKHJ_RS02965 WP_392452884.1 555978..557027(+) (sepM) [Streptococcus parasuis strain FZ1]
MKKNKKWLLIVSIIMGTLLIWFSVFVRLPYYIESPGGASDIREVLTVNNEEDEEPGSYNFTYVSVLQATALQLLIAQFNP
YADIVSAEEMTGGADSEEYYRIARFYMETSQNMAKYQGLTLANKDVEMDFFGVYVLDLAEDSTFKNVLNIADTVVSINGK
TFESSQDLIKYVSGLELDSDVTVGYVSDGEEKTADGKIIKLSNGKNGIGITLVDHTEVKSSVPIDFQTGGIGGPSAGMMF
TLAIYTQLAEPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAINAGASVFFVPNNPVDPEILKKNPTAKTNYEEAKEA
AEKANADIEIVPVTTVQEAIDYLKSTKSE

Nucleotide

• Length: 1050 bp

>NTDB_id=1059200 ACFKHJ_RS02965 WP_392452884.1 555978..557027(+) (sepM) [Streptococcus parasuis strain FZ1]
ATGAAGAAAAATAAGAAATGGCTATTGATTGTTTCAATTATTATGGGGACGTTATTGATATGGTTTTCCGTATTTGTTCG
TCTACCATATTATATTGAGAGTCCTGGAGGGGCTTCGGATATTCGGGAAGTATTGACAGTCAACAATGAAGAAGATGAGG
AGCCAGGTTCTTATAATTTTACCTATGTATCGGTCTTGCAGGCAACAGCCTTACAGTTGCTGATTGCTCAGTTTAACCCC
TACGCAGATATTGTTTCTGCAGAAGAAATGACGGGTGGTGCAGACAGTGAAGAATACTATCGGATAGCTCGATTTTATAT
GGAAACCTCTCAAAACATGGCTAAATATCAAGGTTTAACCTTGGCAAATAAGGATGTGGAGATGGATTTCTTCGGTGTTT
ACGTGTTGGACTTAGCAGAAGATTCTACATTTAAAAATGTTTTGAATATCGCTGATACGGTGGTTAGTATAAATGGAAAA
ACCTTTGAATCTTCTCAGGATCTAATTAAATATGTTTCAGGCTTAGAACTTGATAGTGATGTAACAGTTGGCTATGTTAG
TGATGGAGAAGAAAAGACTGCCGACGGAAAAATTATCAAATTATCAAATGGTAAAAACGGGATTGGTATCACGCTAGTAG
ACCATACTGAGGTAAAAAGTTCTGTCCCAATTGATTTCCAAACAGGAGGAATTGGTGGTCCAAGTGCTGGTATGATGTTT
ACATTAGCTATTTATACACAGCTGGCAGAGCCAGACTTGCGTGATGGTCGTGTTATTGCAGGAACAGGAACGATTGAACA
AGATGGTTCCGTTGGAGACATCGGAGGAGCAGATAAAAAAGTATTATCTGCGATTAATGCTGGTGCAAGTGTTTTCTTTG
TTCCAAATAATCCAGTGGACCCAGAAATTTTGAAAAAGAATCCAACAGCTAAGACAAACTATGAAGAGGCAAAAGAAGCA
GCAGAAAAGGCCAATGCTGATATTGAAATCGTACCAGTGACGACTGTTCAAGAAGCCATTGATTATTTGAAGAGTACTAA
GAGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	60.983	99.14	0.605