Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | DK42_RS01160 | Genome accession | NZ_CP007571 |
| Coordinates | 203963..204334 (+) | Length | 123 a.a. |
| NCBI ID | WP_000601101.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain GBS2-NM | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 198963..209334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK42_RS01140 (DK42_01155) | - | 200048..201460 (-) | 1413 | WP_017771557.1 | IS1182 family transposase | - |
| DK42_RS01145 (DK42_01160) | comGA | 201625..202596 (+) | 972 | WP_000250798.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DK42_RS01150 (DK42_01165) | comGB | 202490..203533 (+) | 1044 | WP_223297804.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DK42_RS01155 (DK42_01170) | comGF | 203530..203985 (+) | 456 | WP_000793378.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DK42_RS01160 (DK42_01175) | comGG | 203963..204334 (+) | 372 | WP_000601101.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DK42_RS01165 (DK42_01180) | comGH | 204449..205423 (+) | 975 | WP_001008569.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DK42_RS01170 (DK42_01185) | - | 205455..206648 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| DK42_RS01175 | - | 206776..206968 (+) | 193 | Protein_179 | helix-turn-helix transcriptional regulator | - |
| DK42_RS11065 | - | 206947..207213 (+) | 267 | Protein_180 | hypothetical protein | - |
| DK42_RS01180 (DK42_01195) | - | 207282..207947 (+) | 666 | WP_000008108.1 | type II CAAX endopeptidase family protein | - |
| DK42_RS01185 (DK42_01200) | proC | 207968..208738 (-) | 771 | WP_001881026.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13891.14 Da Isoelectric Point: 10.0693
>NTDB_id=105885 DK42_RS01160 WP_000601101.1 203963..204334(+) (comGG) [Streptococcus agalactiae strain GBS2-NM]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFIGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFIGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH
Nucleotide
Download Length: 372 bp
>NTDB_id=105885 DK42_RS01160 WP_000601101.1 203963..204334(+) (comGG) [Streptococcus agalactiae strain GBS2-NM]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTATAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTATAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Streptococcus mutans UA140 |
44.554 |
82.114 |
0.366 |
| comGG | Streptococcus mutans UA159 |
44.554 |
82.114 |
0.366 |