Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   ACFW98_RS19440 Genome accession   NZ_CP170719
Coordinates   3985035..3985691 (+) Length   218 a.a.
NCBI ID   WP_395096642.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP5008     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3980035..3990691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFW98_RS19415 (ACFW98_19415) oppF 3980564..3981481 (+) 918 WP_020955632.1 oligopeptide ABC transporter ATP-binding protein OppF -
  ACFW98_RS19420 (ACFW98_19420) - 3981588..3982775 (+) 1188 WP_015239569.1 putative glycoside hydrolase -
  ACFW98_RS19425 (ACFW98_19425) - 3982893..3983471 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  ACFW98_RS19430 (ACFW98_19430) spx 3983650..3984045 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  ACFW98_RS19435 (ACFW98_19435) - 3984103..3984759 (-) 657 WP_007409109.1 TerC family protein -
  ACFW98_RS19440 (ACFW98_19440) mecA 3985035..3985691 (+) 657 WP_395096642.1 adaptor protein MecA Regulator
  ACFW98_RS19445 (ACFW98_19445) - 3985842..3987002 (+) 1161 WP_395096643.1 competence protein CoiA family protein -
  ACFW98_RS19450 (ACFW98_19450) pepF 3987230..3989059 (+) 1830 WP_094031915.1 oligoendopeptidase F Regulator
  ACFW98_RS19455 (ACFW98_19455) - 3989097..3989264 (-) 168 WP_003155026.1 hypothetical protein -
  ACFW98_RS19460 (ACFW98_19460) spxH 3989550..3990452 (-) 903 WP_007409106.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25963.77 Da        Isoelectric Point: 4.1345

>NTDB_id=1058775 ACFW98_RS19440 WP_395096642.1 3985035..3985691(+) (mecA) [Bacillus amyloliquefaciens strain JP5008]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFNDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=1058775 ACFW98_RS19440 WP_395096642.1 3985035..3985691(+) (mecA) [Bacillus amyloliquefaciens strain JP5008]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCA
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment