Detailed information NTG1058662

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACFXAA_RS11360
• Genome accession: NZ_CP170717
• Coordinates: 2371058..2372170 (-)
• Length: 370 a.a.
• NCBI ID: WP_007409910.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JP5014
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2366058..2377170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFXAA_RS11345 (ACFXAA_11345)	gyrA	2366147..2368606 (-)	2460	WP_061861079.1	DNA gyrase subunit A	-
ACFXAA_RS11350 (ACFXAA_11350)	gyrB	2368822..2370738 (-)	1917	WP_014720600.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
ACFXAA_RS11355 (ACFXAA_11355)	remB	2370795..2371040 (-)	246	WP_004392908.1	extracellular matrix regulator RemB	-
ACFXAA_RS11360 (ACFXAA_11360)	recF	2371058..2372170 (-)	1113	WP_007409910.1	DNA replication/repair protein RecF	Machinery gene
ACFXAA_RS11365 (ACFXAA_11365)	rlbA	2372186..2372401 (-)	216	WP_004392910.1	ribosome maturation protein RlbA	-
ACFXAA_RS11370 (ACFXAA_11370)	dnaN	2372536..2373672 (-)	1137	WP_014416704.1	DNA polymerase III subunit beta	-
ACFXAA_RS11375 (ACFXAA_11375)	dnaA	2373858..2375198 (-)	1341	WP_007409908.1	chromosomal replication initiator protein DnaA	-
ACFXAA_RS11380 (ACFXAA_11380)	rpmH	2375819..2375953 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
ACFXAA_RS11385 (ACFXAA_11385)	rnpA	2376107..2376457 (+)	351	WP_004392944.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42430.36 Da
• Isoelectric Point: 7.0882

>NTDB_id=1058662 ACFXAA_RS11360 WP_007409910.1 2371058..2372170(-) (recF) [Bacillus amyloliquefaciens strain JP5014]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVAKRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGMFRVENGTLVK

Nucleotide

• Length: 1113 bp

>NTDB_id=1058662 ACFXAA_RS11360 WP_007409910.1 2371058..2372170(-) (recF) [Bacillus amyloliquefaciens strain JP5014]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGGGAAAATGCCCAAGGCAAAACCAATCTGATGGAAGCCATCTATGTCCTTTCGATGGCAAAATCACACCGCA
CCTCAAATGACAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGAAACGGGGAC
ATCCCGATGCAGCTTGTCATCTCCAAAAAAGGTAAAAAGGGCAAGGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCTGAGGATTTAAATCTCGTCAAAGGAAGCCCTCAGGTGAGGAGGAGAT
TTCTCGATATGGAGATCGGGCAGGTTTCTGCCGTTTATCTGTATGATTTATCTCTGTATCAAAAAATCCTTTCACAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACCATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCAAAAGTTGTCGCCAAACGTCTGCAGTTTACGGCGCAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGACTTGAAGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAGTCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGACCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACGTACGGTTCGCAGGGACAGCAGCGTACGACGGCTTTGT
CTTTGAAGCTGGCCGAAATAGATTTGATTCATGAAGAAATCGGAGAATACCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGACAGTCCCATTTGCTTCATACGATCCAAGGCCGTGTGCAGACATTTGTCACCACGACAAGCGT
GGATGGCATTGACCACGATACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTACGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.324	100	0.943