Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ACFDA4_RS01595 Genome accession   NZ_CP170661
Coordinates   355093..355989 (+) Length   298 a.a.
NCBI ID   WP_002475631.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain CCARM 3A686     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 350093..360989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDA4_RS01575 (ACFDA4_01575) - 350778..352322 (+) 1545 WP_391039395.1 NAD-dependent epimerase/dehydratase family protein -
  ACFDA4_RS01580 (ACFDA4_01580) - 352446..353915 (-) 1470 WP_002501359.1 alkaline phosphatase -
  ACFDA4_RS01585 (ACFDA4_01585) - 354212..354391 (+) 180 WP_002475662.1 hypothetical protein -
  ACFDA4_RS01590 (ACFDA4_01590) braR 354422..355087 (+) 666 WP_002475664.1 response regulator transcription factor Regulator
  ACFDA4_RS01595 (ACFDA4_01595) braS 355093..355989 (+) 897 WP_002475631.1 HAMP domain-containing sensor histidine kinase Regulator
  ACFDA4_RS01600 (ACFDA4_01600) - 356100..356849 (+) 750 WP_002475632.1 ABC transporter ATP-binding protein -
  ACFDA4_RS01605 (ACFDA4_01605) - 356851..358863 (+) 2013 WP_391039397.1 FtsX-like permease family protein -
  ACFDA4_RS01610 (ACFDA4_01610) - 358967..359557 (+) 591 WP_002447015.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34931.55 Da        Isoelectric Point: 6.7743

>NTDB_id=1058564 ACFDA4_RS01595 WP_002475631.1 355093..355989(+) (braS) [Staphylococcus epidermidis strain CCARM 3A686]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLNFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDTQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNQGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=1058564 ACFDA4_RS01595 WP_002475631.1 355093..355989(+) (braS) [Staphylococcus epidermidis strain CCARM 3A686]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTATTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATCATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAATTTTAAAAAGAACGAACATCTTAAAGATAAAGTGGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATTACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTACA
CAAGCCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
CATTTTAACCGATACACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATATGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACAGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTAAATCAGGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60

98.993

0.594

Multiple sequence alignment