Detailed information NTG1058514

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACFXAD_RS15035
• Genome accession: NZ_CP170653
• Coordinates: 3073798..3074751 (-)
• Length: 317 a.a.
• NCBI ID: WP_015417205.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JP5011
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3068798..3079751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFXAD_RS15005 (ACFXAD_15005)	-	3068953..3069939 (-)	987	WP_033574515.1	ABC transporter ATP-binding protein	-
ACFXAD_RS15010 (ACFXAD_15010)	-	3070113..3070898 (-)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACFXAD_RS15015 (ACFXAD_15015)	fabF	3070980..3072218 (-)	1239	WP_015417206.1	beta-ketoacyl-ACP synthase II	-
ACFXAD_RS15020 (ACFXAD_15020)	-	3072241..3073179 (-)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ACFXAD_RS15025 (ACFXAD_15025)	-	3073347..3073565 (+)	219	WP_007409123.1	hypothetical protein	-
ACFXAD_RS15030 (ACFXAD_15030)	comZ	3073594..3073785 (-)	192	WP_003155061.1	ComZ family protein	Regulator
ACFXAD_RS15035 (ACFXAD_15035)	med	3073798..3074751 (-)	954	WP_015417205.1	BMP family ABC transporter substrate-binding protein	Regulator
ACFXAD_RS15040 (ACFXAD_15040)	-	3074841..3075407 (-)	567	WP_015417204.1	NAD(P) binding enzyme	-
ACFXAD_RS15045 (ACFXAD_15045)	-	3075490..3076224 (-)	735	WP_015417203.1	hypothetical protein	-
ACFXAD_RS15050 (ACFXAD_15050)	-	3076485..3076670 (+)	186	WP_003155069.1	YjzD family protein	-
ACFXAD_RS15055 (ACFXAD_15055)	-	3076707..3076886 (-)	180	WP_003155070.1	YjzC family protein	-
ACFXAD_RS15060 (ACFXAD_15060)	argF	3076962..3077933 (-)	972	WP_039252015.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35328.96 Da
• Isoelectric Point: 4.6686

>NTDB_id=1058514 ACFXAD_RS15035 WP_015417205.1 3073798..3074751(-) (med) [Bacillus amyloliquefaciens strain JP5011]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1058514 ACFXAD_RS15035 WP_015417205.1 3073798..3074751(-) (med) [Bacillus amyloliquefaciens strain JP5011]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782