Detailed information NTG1058396

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACFW99_RS05520
• Genome accession: NZ_CP170651
• Coordinates: 1097994..1098947 (+)
• Length: 317 a.a.
• NCBI ID: WP_072177123.1
• Uniprot ID: A0AAP5QP93
• Organism: Bacillus amyloliquefaciens strain JP5025
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1092994..1103947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFW99_RS05495 (ACFW99_05495)	argF	1094812..1095783 (+)	972	WP_159354005.1	ornithine carbamoyltransferase	-
ACFW99_RS05500 (ACFW99_05500)	-	1095859..1096038 (+)	180	WP_003155070.1	YjzC family protein	-
ACFW99_RS05505 (ACFW99_05505)	-	1096074..1096259 (-)	186	WP_007409129.1	YjzD family protein	-
ACFW99_RS05510 (ACFW99_05510)	-	1096520..1097254 (+)	735	WP_014417405.1	hypothetical protein	-
ACFW99_RS05515 (ACFW99_05515)	-	1097337..1097903 (+)	567	WP_021494976.1	hypothetical protein	-
ACFW99_RS05520 (ACFW99_05520)	med	1097994..1098947 (+)	954	WP_072177123.1	BMP family ABC transporter substrate-binding protein	Regulator
ACFW99_RS05525 (ACFW99_05525)	comZ	1098960..1099151 (+)	192	WP_014417408.1	ComZ family protein	Regulator
ACFW99_RS05530 (ACFW99_05530)	-	1099180..1099398 (-)	219	WP_007409123.1	hypothetical protein	-
ACFW99_RS05535 (ACFW99_05535)	-	1099566..1100504 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ACFW99_RS05540 (ACFW99_05540)	fabF	1100527..1101765 (+)	1239	WP_259425276.1	beta-ketoacyl-ACP synthase II	-
ACFW99_RS05545 (ACFW99_05545)	-	1101848..1102633 (+)	786	WP_014417410.1	DUF2268 domain-containing protein	-
ACFW99_RS05550 (ACFW99_05550)	-	1102807..1103793 (+)	987	WP_061862067.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35330.94 Da
• Isoelectric Point: 4.6686

>NTDB_id=1058396 ACFW99_RS05520 WP_072177123.1 1097994..1098947(+) (med) [Bacillus amyloliquefaciens strain JP5025]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1058396 ACFW99_RS05520 WP_072177123.1 1097994..1098947(+) (med) [Bacillus amyloliquefaciens strain JP5025]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTGATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGCGTCATCGCCTCCTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782