Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACFXAB_RS17050 Genome accession   NZ_CP170650
Coordinates   3485290..3485481 (-) Length   63 a.a.
NCBI ID   WP_014417408.1    Uniprot ID   I2C3H7
Organism   Bacillus velezensis strain JP5039     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3480290..3490481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAB_RS17025 (ACFXAB_17025) - 3480649..3481635 (-) 987 WP_014417411.1 ABC transporter ATP-binding protein -
  ACFXAB_RS17030 (ACFXAB_17030) - 3481809..3482594 (-) 786 WP_014417410.1 DUF2268 domain-containing protein -
  ACFXAB_RS17035 (ACFXAB_17035) fabF 3482677..3483915 (-) 1239 WP_014417409.1 beta-ketoacyl-ACP synthase II -
  ACFXAB_RS17040 (ACFXAB_17040) - 3483938..3484876 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ACFXAB_RS17045 (ACFXAB_17045) - 3485043..3485261 (+) 219 WP_007409123.1 hypothetical protein -
  ACFXAB_RS17050 (ACFXAB_17050) comZ 3485290..3485481 (-) 192 WP_014417408.1 ComZ family protein Regulator
  ACFXAB_RS17055 (ACFXAB_17055) med 3485494..3486447 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  ACFXAB_RS17060 (ACFXAB_17060) - 3486538..3487104 (-) 567 WP_032863798.1 hypothetical protein -
  ACFXAB_RS17065 (ACFXAB_17065) - 3487187..3487921 (-) 735 WP_014417405.1 hypothetical protein -
  ACFXAB_RS17070 (ACFXAB_17070) - 3488182..3488367 (+) 186 WP_007409129.1 YjzD family protein -
  ACFXAB_RS17075 (ACFXAB_17075) - 3488404..3488583 (-) 180 WP_003155070.1 YjzC family protein -
  ACFXAB_RS17080 (ACFXAB_17080) argF 3488659..3489630 (-) 972 WP_014417404.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7185.30 Da        Isoelectric Point: 4.2259

>NTDB_id=1058367 ACFXAB_RS17050 WP_014417408.1 3485290..3485481(-) (comZ) [Bacillus velezensis strain JP5039]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEIIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1058367 ACFXAB_RS17050 WP_014417408.1 3485290..3485481(-) (comZ) [Bacillus velezensis strain JP5039]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATAATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment