Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   ACFXAB_RS15780 Genome accession   NZ_CP170650
Coordinates   3252168..3252632 (+) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain JP5039     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3247168..3257632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAB_RS15755 (ACFXAB_15755) - 3247675..3248223 (-) 549 WP_014417610.1 hypothetical protein -
  ACFXAB_RS15760 (ACFXAB_15760) fadH 3248337..3249101 (-) 765 WP_014417609.1 2,4-dienoyl-CoA reductase -
  ACFXAB_RS15765 (ACFXAB_15765) - 3249245..3250108 (+) 864 WP_014417608.1 metallophosphoesterase -
  ACFXAB_RS15770 (ACFXAB_15770) - 3250183..3250677 (+) 495 WP_088056573.1 L,D-transpeptidase family protein -
  ACFXAB_RS15775 (ACFXAB_15775) - 3250753..3252045 (+) 1293 WP_014417606.1 MFS transporter -
  ACFXAB_RS15780 (ACFXAB_15780) kre 3252168..3252632 (+) 465 WP_014417605.1 YkyB family protein Regulator
  ACFXAB_RS15785 (ACFXAB_15785) cheV 3252675..3253586 (-) 912 WP_014417604.1 chemotaxis protein CheV -
  ACFXAB_RS15790 (ACFXAB_15790) - 3253775..3253936 (+) 162 WP_007409608.1 hypothetical protein -
  ACFXAB_RS15795 (ACFXAB_15795) - 3254137..3255350 (+) 1214 Protein_3063 aminotransferase A -
  ACFXAB_RS15800 (ACFXAB_15800) - 3255331..3257151 (-) 1821 WP_021493759.1 PAS domain-containing protein -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=1058360 ACFXAB_RS15780 WP_014417605.1 3252168..3252632(+) (kre) [Bacillus velezensis strain JP5039]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1058360 ACFXAB_RS15780 WP_014417605.1 3252168..3252632(+) (kre) [Bacillus velezensis strain JP5039]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTAACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains


Predicted by InterproScan.

(13-127)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929


Multiple sequence alignment