Detailed information NTG1058358

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: ACFXAB_RS15570
• Genome accession: NZ_CP170650
• Coordinates: 3215987..3216271 (-)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain JP5039
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 3210987..3221271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFXAB_RS15550 (ACFXAB_15550)	ade	3211093..3212826 (-)	1734	WP_014417636.1	adenine deaminase	-
ACFXAB_RS15555 (ACFXAB_15555)	ktrC	3212975..3213640 (-)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
ACFXAB_RS15560 (ACFXAB_15560)	-	3213681..3214508 (-)	828	WP_014417635.1	gamma-glutamylcyclotransferase	-
ACFXAB_RS15565 (ACFXAB_15565)	-	3214510..3215814 (-)	1305	WP_014417634.1	ATP-binding protein	-
ACFXAB_RS15570 (ACFXAB_15570)	abrB	3215987..3216271 (-)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
ACFXAB_RS15575 (ACFXAB_15575)	mreBH	3216542..3217549 (+)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
ACFXAB_RS15580 (ACFXAB_15580)	-	3217621..3217755 (+)	135	WP_003154559.1	protein YkpC	-
ACFXAB_RS15585 (ACFXAB_15585)	-	3217856..3219088 (+)	1233	WP_007409644.1	aminopeptidase	-
ACFXAB_RS15590 (ACFXAB_15590)	-	3219119..3220027 (-)	909	WP_014417631.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=1058358 ACFXAB_RS15570 WP_014417633.1 3215987..3216271(-) (abrB) [Bacillus velezensis strain JP5039]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=1058358 ACFXAB_RS15570 WP_014417633.1 3215987..3216271(-) (abrB) [Bacillus velezensis strain JP5039]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543