Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AAA982_RS09120 Genome accession   NZ_AP028601
Coordinates   1771922..1772959 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain PF1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1766922..1777959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAA982_RS09095 (TKY113292_17810) - 1767661..1768992 (-) 1332 WP_000390039.1 hemolysin family protein -
  AAA982_RS09100 (TKY113292_17820) endA 1769283..1770107 (-) 825 WP_317649145.1 DNA-entry nuclease EndA Machinery gene
  AAA982_RS09105 (TKY113292_17830) - 1770146..1770334 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  AAA982_RS09110 (TKY113292_17840) murA 1770327..1771610 (-) 1284 WP_317649434.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  AAA982_RS09115 (TKY113292_17850) - 1771634..1771864 (-) 231 WP_000250393.1 DUF1146 family protein -
  AAA982_RS09120 (TKY113292_17860) sepM 1771922..1772959 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  AAA982_RS09125 (TKY113292_17870) coaD 1772943..1773431 (-) 489 WP_001280769.1 pantetheine-phosphate adenylyltransferase -
  AAA982_RS09130 (TKY113292_17880) rsmD 1773421..1773960 (-) 540 WP_000706963.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AAA982_RS09135 (TKY113292_17890) asnA 1774025..1775017 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  AAA982_RS09140 (TKY113292_17900) - 1775129..1775812 (-) 684 WP_001016913.1 Bax inhibitor-1/YccA family protein -
  AAA982_RS09145 (TKY113292_17910) - 1775868..1776608 (-) 741 WP_000152678.1 RNA methyltransferase -
  AAA982_RS09150 (TKY113292_17920) - 1776642..1776920 (+) 279 WP_001174613.1 acylphosphatase -
  AAA982_RS09155 (TKY113292_17930) yidC 1776998..1777924 (+) 927 WP_000835942.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=105834 AAA982_RS09120 WP_000727277.1 1771922..1772959(-) (sepM) [Streptococcus pneumoniae strain PF1]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=105834 AAA982_RS09120 WP_000727277.1 1771922..1772959(-) (sepM) [Streptococcus pneumoniae strain PF1]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGAAAAAATGGAATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment