Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DK41_RS06265 Genome accession   NZ_CP007570
Coordinates   1265066..1265548 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain GBS1-NY     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1260066..1270548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK41_RS06245 (DK41_06335) alsS 1260325..1262007 (-) 1683 WP_000140346.1 acetolactate synthase AlsS -
  DK41_RS06250 (DK41_06340) - 1262117..1263343 (-) 1227 WP_000934876.1 hypothetical protein -
  DK41_RS06255 (DK41_06345) - 1263333..1264523 (-) 1191 WP_001081540.1 AI-2E family transporter -
  DK41_RS06260 (DK41_06350) - 1264615..1265076 (-) 462 WP_000796045.1 NUDIX hydrolase -
  DK41_RS06265 (DK41_06355) mutX 1265066..1265548 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  DK41_RS06270 (DK41_06360) hylB 1265765..1268983 (+) 3219 WP_000403398.1 hyaluronate lyase -
  DK41_RS06275 (DK41_06365) rfbB 1269035..1270081 (-) 1047 WP_000134282.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=105830 DK41_RS06265 WP_000163512.1 1265066..1265548(-) (mutX) [Streptococcus agalactiae strain GBS1-NY]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=105830 DK41_RS06265 WP_000163512.1 1265066..1265548(-) (mutX) [Streptococcus agalactiae strain GBS1-NY]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment